C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000605409 RP11-579D7.8-001 ENSG00000271547 9606 - 12:48800576-48801086 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLungOvaryTestisENST00000605409
Transcript ID Adrenal Breast Kidney Lung Ovary Testis
ENST00000605409 0.089±0.00 0.048±0.00 0.140±0.00 0.231±0.00 0.450±0.00 0.083±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003DH CIL_0003DH_0002 CGP 12:48766194-48828941

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103188 1700037H04Rik-001 protein_coding Mus_musculus 0 403
ENSMUST00000028800 1700037H04Rik-002 protein_coding Mus_musculus 0 383
ENSMUST00000133602 1700037H04Rik-005 protein_coding Mus_musculus 0 353
ENSMUST00000184121 1700037H04Rik-006 nonsense_mediated_decay Mus_musculus 0 252
ENSMUST00000136838 1700037H04Rik-004 retained_intron Mus_musculus 0 252
ENSMUST00000184535 1700037H04Rik-003 nonsense_mediated_decay Mus_musculus 0 252

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