C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700037H04 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000103188 1700037H04Rik-001 ENSMUSG00000027327 10090 - 2:131146325-131160020 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000103188
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000103188 116.857±33.10 86.829±34.61 21.396±0.89 46.613±8.09 122.160±34.30 25.319±3.67 10.384±3.74 39.526±0.89 43.948±45.67 17.236±1.60 1.977±1.29 37.174±11.27 22.344±5.28 231.082±112.32

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033D CIL_00033D_0002 CGP 2:131146324-131187282

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217195 C20orf27-002 protein_coding Homo_sapiens 0 765
ENST00000379772 C20orf27-001 protein_coding Homo_sapiens 0 839
ENST00000399672 C20orf27-005 protein_coding Homo_sapiens 0 832
ENST00000399683 C20orf27-004 protein_coding Homo_sapiens 0 359
ENST00000568660 RP11-2C24.5-001 processed_pseudogene Homo_sapiens 0 401
ENST00000605409 RP11-579D7.8-001 processed_pseudogene Homo_sapiens 0 403

Loading