C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700037H04 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000184535 1700037H04Rik-003 ENSMUSG00000027327 10090 - 2:131146324-131160034 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonLiverLungOvaryENSMUST00000184535
Transcript ID Breast Colon Liver Lung Ovary
ENSMUST00000184535 29.251±5.57 9.960±1.86 1.023±0.27 4.909±1.40 11.507±2.52

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033D CIL_00033D_0002 CGP 2:131146324-131187282

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217195 C20orf27-002 protein_coding Homo_sapiens 0 573
ENST00000379772 C20orf27-001 protein_coding Homo_sapiens 0 573
ENST00000399672 C20orf27-005 protein_coding Homo_sapiens 0 573
ENST00000399683 C20orf27-004 protein_coding Homo_sapiens 0 281
ENST00000605409 RP11-579D7.8-001 processed_pseudogene Homo_sapiens 0 252

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