C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: RIKEN cDNA 1700037H04 gene
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000136838 1700037H04Rik-004 ENSMUSG00000027327 10090 - 2:131146325-131149028 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000136838
Transcript ID Adrenal Bladder Brain Breast Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000136838 20.524±7.09 3.115±0.09 1.921±0.00 19.976±0.00 1.797±0.67 0.687±0.00 4.005±0.27 0.727±0.15 3.383±0.36 3.139±0.86 1.522±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033D CIL_00033D_0002 CGP 2:131146324-131187282

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000217195 C20orf27-002 protein_coding Homo_sapiens 0 573
ENST00000379772 C20orf27-001 protein_coding Homo_sapiens 0 573
ENST00000399672 C20orf27-005 protein_coding Homo_sapiens 0 573
ENST00000399683 C20orf27-004 protein_coding Homo_sapiens 0 281
ENST00000605409 RP11-579D7.8-001 processed_pseudogene Homo_sapiens 0 252

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