C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SLIT-ROBO Rho GTPase activating protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000188770 Srgap2-006 ENSMUSG00000026425 10090 - 1:131295221-131344547 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000188770
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000188770 5.823±1.23 4.442±0.48 4.039±0.54 1.164±0.28 2.509±0.68 2.153±0.19 1.519±0.50 7.518±0.65 1.189±0.19 3.850±1.16 3.709±2.12 1.334±0.14

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005VZ CIL_0005VZ_0002 CGP 1:131254343-131527352
CIL_00012Y CIL_00012Y_0003 CGP 1:131285251-131539872

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000304465 SRGAP2C-201 protein_coding Homo_sapiens 0 267
ENST00000367123 SRGAP2C-001 protein_coding Homo_sapiens 0 267
ENST00000419187 SRGAP2-201 protein_coding Homo_sapiens 0 267
ENST00000573034 SRGAP2-001 protein_coding Homo_sapiens 0 1892
ENST00000604010 SRGAP2-015 protein_coding Homo_sapiens 0 497
ENST00000604247 SRGAP2-005 retained_intron Homo_sapiens 0 743
ENST00000604419 SRGAP2-013 retained_intron Homo_sapiens 0 545
ENST00000604423 SRGAP2-006 retained_intron Homo_sapiens 0 267
ENST00000604925 SRGAP2-014 protein_coding Homo_sapiens 0 974
ENST00000605476 SRGAP2-004 protein_coding Homo_sapiens 0 2377
ENST00000605551 SRGAP2D-001 unprocessed_pseudogene Homo_sapiens 0 261
ENST00000605610 SRGAP2-002 protein_coding Homo_sapiens 0 1635
ENST00000612199 SRGAP2B-001 protein_coding Homo_sapiens 0 261
ENST00000619678 SRGAP2B-201 protein_coding Homo_sapiens 0 261
ENST00000624873 SRGAP2-016 protein_coding Homo_sapiens 0 1892

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