C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000605810 RP11-963H1.1-001 ENSG00000271034 9606 - 3:70125070-70126609 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastOvaryTestisENST00000605810
Transcript ID Breast Ovary Testis
ENST00000605810 0.080±0.00 0.015±0.00 0.011±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008QD CIL_0008QD_0001 VISTA 3:69770896-70373326
CIL_0007L4 CIL_0007L4_0001 UCNEbase 3:70042617-71525233

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000106536 Rnpc3-003 protein_coding Mus_musculus 0 1476
ENSMUST00000092154 Rnpc3-001 protein_coding Mus_musculus 0 1476
ENSMUST00000106535 Rnpc3-002 protein_coding Mus_musculus 0 1461
ENSMUST00000153853 Rnpc3-005 protein_coding Mus_musculus 0 1400
ENSMUST00000123232 Rnpc3-006 processed_transcript Mus_musculus 0 453
ENSMUST00000132220 Rnpc3-008 processed_transcript Mus_musculus 0 329
ENSMUST00000135712 Rnpc3-007 processed_transcript Mus_musculus 0 296

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