C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: T-box 18
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000606325 TBX18-003 ENSG00000112837 9606 - 6:84744261-84763453 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartLiverMuscleENST00000606325
Transcript ID Brain Heart Liver Muscle
ENST00000606325 0.578±0.00 0.662±0.00 0.075±0.00 0.962±0.47

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00066X CIL_00066X_0001 CGP 6:84124241-84764519
CIL_0007K0 CIL_0007K0_0001 UCNEbase 6:84361462-85614404
CIL_00066W CIL_00066W_0001 CGP 6:84687351-85495791

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003700 IEA sequence-specific DNA binding transcription factor activity
GO:0005634 IEA nucleus
GO:0006351 IEA transcription, DNA-templated
GO:0006355 IEA regulation of transcription, DNA-templated

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000034991 Tbx18-001 protein_coding Mus_musculus 0 887
ENSMUST00000186698 Tbx18-002 processed_transcript Mus_musculus 0 435

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