C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: PR domain containing 16
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000607632 PRDM16-010 ENSG00000142611 9606 + 1:3069183-3186591 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderColonHeartLiverLungOvaryENST00000607632
Transcript ID Bladder Colon Heart Liver Lung Ovary
ENST00000607632 5.308±0.00 0.497±0.00 1.637±0.00 0.359±0.00 1.097±0.00 4.677±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007XZ CIL_0007XZ_0001 VISTA 1:2589306-3193079
CIL_0007TB CIL_0007TB_0001 VISTA 1:2974017-3574864
CIL_00099V CIL_00099V_0001 VISTA 1:3045529-3649801

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000124771 Prdm16-008 protein_coding Mus_musculus 0 597
ENSMUST00000097759 Prdm16-007 protein_coding Mus_musculus 0 597
ENSMUST00000105638 Prdm16-006 protein_coding Mus_musculus 0 597
ENSMUST00000141164 Prdm16-005 processed_transcript Mus_musculus 0 597
ENSMUST00000105636 Prdm16-004 protein_coding Mus_musculus 0 597
ENSMUST00000070313 Prdm16-003 protein_coding Mus_musculus 0 597
ENSMUST00000105637 Prdm16-002 protein_coding Mus_musculus 0 597
ENSMUST00000030902 Prdm16-001 protein_coding Mus_musculus 0 597
ENSMUST00000149605 Prdm16-009 processed_transcript Mus_musculus 0 540

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