C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin, beta 2 (complement component 3 receptor 3 and 4 subunit)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000610622 ITGB2-202 ENSG00000160255 9606 - 21:44886358-44920869 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastColonLungOvaryPlacentaENST00000610622
Transcript ID Brain Breast Colon Lung Ovary Placenta
ENST00000610622 0.475±0.00 6.308±0.33 0.810±0.00 4.781±0.00 4.513±0.00 17.724±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004872 IEA receptor activity
GO:0007160 IEA cell-matrix adhesion
GO:0007229 IEA integrin-mediated signaling pathway
GO:0007275 IEA multicellular organismal development
GO:0008305 IEA integrin complex
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000299 Itgb2-001 protein_coding Mus_musculus 0 1445
ENSMUST00000113773 Itgb2l-002 protein_coding Mus_musculus 0 623
ENSMUST00000000161 Itgb2l-001 protein_coding Mus_musculus 0 623
ENSMUST00000131567 Itgb2l-003 nonsense_mediated_decay Mus_musculus 0 621
ENSMUST00000131777 Itgb2l-004 processed_transcript Mus_musculus 0 418
ENSMUST00000153541 Itgb2-003 nonsense_mediated_decay Mus_musculus 0 350
ENSMUST00000156644 Itgb2-002 nonsense_mediated_decay Mus_musculus 0 350

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