C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: cadherin 4, type 1, R-cadherin (retinal)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611855 CDH4-002 ENSG00000179242 9606 + 20:61570135-61937218 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastENST00000611855
Transcript ID Breast
ENST00000611855 0.087±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000693 CIL_000693_0002 CGP 20:61252426-62065810

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0007156 IEA homophilic cell adhesion via plasma membrane adhesion molecules
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000000314 Cdh4-001 protein_coding Mus_musculus 0 2442
ENSDART00000097934 cdh4-201 protein_coding Danio_rerio 0 654
ENSMUST00000108911 Cdh4-002 protein_coding Mus_musculus 0 520

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