C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CDC42 effector protein (Rho GTPase binding) 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000611976 CDC42EP3-201 ENSG00000163171 9606 - 2:37641882-37672535 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartMuscleENST00000611976
Transcript ID Brain Colon Heart Muscle
ENST00000611976 0.826±0.00 1.369±0.00 1.958±0.00 2.568±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085G CIL_00085G_0001 VISTA 2:37116727-37718317
CIL_0008VK CIL_0008VK_0001 VISTA 2:37223010-37826535
CIL_0002IM CIL_0002IM_0001 CGP 2:37344574-37738468
CIL_0002IP CIL_0002IP_0001 CGP 2:37641882-38067142

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005519 TAS cytoskeletal regulatory protein binding
GO:0005737 IEA cytoplasm
GO:0007165 TAS signal transduction
GO:0008360 IEA regulation of cell shape
GO:0015629 IDA actin cytoskeleton
GO:0016020 IEA membrane

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000068958 Cdc42ep3-201 protein_coding Mus_musculus 0 976

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