C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: coiled-coil domain containing 47
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612558 CCDC47-201 ENSG00000108588 9606 - 17:63746427-63764793 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaENST00000612558
Transcript ID Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000612558 13.534±0.00 19.434±4.50 13.976±0.00 14.806±0.54 10.783±5.59 20.565±0.46 11.803±0.90 16.193±0.53 15.030±7.43 15.278±0.00 17.549±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009B9 CIL_0009B9_0001 VISTA 17:63374232-63977730
CIL_0006Q3 CIL_0006Q3_0001 CGP 17:63745250-63819317

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000002043 Ccdc47-001 protein_coding Mus_musculus 0 1746
ENSMUST00000121523 Gm12097-001 processed_pseudogene Mus_musculus 0 1303
ENSMUST00000125383 Ccdc47-005 protein_coding Mus_musculus 0 856
ENSMUST00000106865 Ccdc47-003 protein_coding Mus_musculus 0 725
ENSMUST00000137915 Ccdc47-004 protein_coding Mus_musculus 0 466

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