C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cat eye syndrome chromosome region, candidate 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000612582 CECR2-001 ENSG00000099954 9606 + 22:17477093-17558149 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverMuscleOvaryPlacentaTestisENST00000612582
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Muscle Ovary Placenta Testis
ENST00000612582 0.171±0.00 0.541±0.00 0.022±0.00 0.031±0.00 0.979±0.00 0.609±0.00 0.867±0.00 0.655±0.43 0.142±0.03 0.119±0.02 1.528±0.19

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E1 CIL_0002E1_0001 CGP 22:17359949-17590994

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100993 Cecr2-002 protein_coding Mus_musculus 0 2091
ENSMUST00000112686 Cecr2-001 protein_coding Mus_musculus 0 1925
ENSMUST00000143563 Cecr2-007 protein_coding Mus_musculus 0 756
ENSMUST00000124634 Cecr2-006 processed_transcript Mus_musculus 0 754
ENSMUST00000129803 Cecr2-005 protein_coding Mus_musculus 0 512
ENSMUST00000148346 Cecr2-003 retained_intron Mus_musculus 8e-33 148
ENSMUST00000135109 Cecr2-004 processed_transcript Mus_musculus 3e-32 147

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