C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: R3H domain and coiled-coil containing 1-like
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000613938 R3HCC1L-204 ENSG00000166024 9606 + 10:98163287-98244892 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverMuscleOvaryPlacentaTestisENST00000613938
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENST00000613938 0.876±0.00 3.946±0.00 1.116±0.00 0.936±0.00 3.648±0.00 1.402±0.00 0.812±0.00 2.002±1.19 1.131±0.01 5.618±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001BX CIL_0001BX_0002 CGP 10:97865000-98244897
CIL_00054Z CIL_00054Z_0001 CGP 10:98134624-98268250

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0035145 IDA exon-exon junction complex

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160107 R3hcc1l-003 protein_coding Mus_musculus 0 767
ENSMUST00000026188 R3hcc1l-001 protein_coding Mus_musculus 0 767
ENSMUST00000162238 R3hcc1l-002 retained_intron Mus_musculus 0 327
ENSMUST00000161422 R3hcc1l-005 retained_intron Mus_musculus 0 206

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