C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000614742 ITGA4-201 ENSG00000115232 9606 + 2:181457225-181535562 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonHeartOvaryPlacentaTestisENST00000614742
Transcript ID Colon Heart Ovary Placenta Testis
ENST00000614742 1.377±0.00 0.230±0.00 1.676±0.27 3.272±0.00 0.384±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004BZ CIL_0004BZ_0002 CGP 2:180967248-181536187
CIL_00080Y CIL_00080Y_0001 VISTA 2:181386314-181987082
CIL_0004C0 CIL_0004C0_0002 CGP 2:181457202-181680665

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000099972 Itga4-001 protein_coding Mus_musculus 0 3171
ENSMUST00000135919 Itga4-004 processed_transcript Mus_musculus 0 1712
ENSMUST00000126312 Itga4-005 processed_transcript Mus_musculus 0 1306

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