C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: GA binding protein transcription factor, beta subunit 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000615671 GABPB1-011 ENSG00000104064 9606 - 15:50348936-50355201 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000615671
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000615671 2.134±0.00 2.961±0.00 0.837±0.00 1.606±0.37 1.631±0.19 1.441±0.10 0.586±0.34 0.946±0.16 0.977±0.24 1.513±0.43 0.494±0.26 1.575±0.20 1.253±0.24 1.605±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002E6 CIL_0002E6_0001 CGP 15:50241947-50355408
CIL_00070V CIL_00070V_0001 CGP 15:50275392-50514419

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000089745 Gabpb1-009 protein_coding Mus_musculus 0 257
ENSMUST00000110425 Gabpb1-001 protein_coding Mus_musculus 0 257
ENSMUST00000103227 Gabpb1-003 protein_coding Mus_musculus 0 243
ENSMUST00000110424 Gabpb1-004 protein_coding Mus_musculus 4.06377e-44 185
ENSMUST00000124972 Gabpb1-005 protein_coding Mus_musculus 9e-21 108
ENSMUST00000130263 Gabpb1-006 processed_transcript Mus_musculus 0.0000000000001 84

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