C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cullin 3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617432 CUL3-202 ENSG00000036257 9606 - 2:224473934-224505971 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000617432
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000617432 5.653±0.00 10.295±0.00 8.572±0.00 10.825±2.93 6.749±0.39 6.429±0.17 5.600±1.39 11.289±2.55 8.757±0.70 9.128±1.04 15.248±6.24 12.002±0.84 7.118±0.20 43.450±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006XN CIL_0006XN_0001 CGP 2:224378698-224585397
CIL_0006XM CIL_0006XM_0001 CGP 2:224470150-225042445

Gene Ontology

GO IDEvidence TypeGO Description
GO:0006511 IEA ubiquitin-dependent protein catabolic process
GO:0031461 IEA cullin-RING ubiquitin ligase complex
GO:0031625 IEA ubiquitin protein ligase binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164108 Cul3-002 protein_coding Mus_musculus 0 2169
ENSMUST00000163119 Cul3-001 protein_coding Mus_musculus 0 2169
ENSMUST00000167794 Cul3-006 retained_intron Mus_musculus 0 771
ENSMUST00000168372 Cul3-005 protein_coding Mus_musculus 0 538
ENSDART00000125379 protein_coding Danio_rerio 1e-37 161

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