C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Shwachman-Bodian-Diamond syndrome
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000617799 SBDS-201 ENSG00000126524 9606 - 7:66988341-66995587 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastColonOvaryPlacentaTestisENST00000617799
Transcript ID Breast Colon Ovary Placenta Testis
ENST00000617799 9.024±0.00 5.238±0.00 35.510±0.00 12.307±0.00 15.735±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005UR CIL_0005UR_0001 CGP 7:66921225-66995601
CIL_0005US CIL_0005US_0001 CGP 7:66987677-67239519

Gene Ontology

GO IDEvidence TypeGO Description
GO:0042254 IEA ribosome biogenesis

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000026387 Sbds-001 protein_coding Mus_musculus 0 913
ENSMUST00000139211 Sbds-002 nonsense_mediated_decay Mus_musculus 0 647
ENSMUST00000125625 Sbds-003 protein_coding Mus_musculus 0 580

Loading