C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: TNF receptor-associated factor 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618771 TRAF4-201 ENSG00000076604 9606 + 17:28744005-28749577 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonKidneyLiverLungPlacentaTestisENST00000618771
Transcript ID Adipose Adrenal Breast Colon Kidney Liver Lung Placenta Testis
ENST00000618771 2.662±0.00 13.292±0.00 16.226±0.00 6.339±0.00 27.515±0.00 9.882±9.03 29.307±0.00 10.297±0.00 7.551±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004ZR CIL_0004ZR_0002 CGP 17:28725897-28750958

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding
GO:0008270 IEA zinc ion binding
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000017530 Traf4-001 protein_coding Mus_musculus 0 383
ENSMUST00000149437 Traf4-002 retained_intron Mus_musculus 0 383
ENSMUST00000148218 Traf4-003 retained_intron Mus_musculus 0 342

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