C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: low density lipoprotein receptor-related protein 1B
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000618808 LRP1B-201 ENSG00000168702 9606 - 2:140238151-141254642 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyMuscleOvaryPlacentaTestisENST00000618808
Transcript ID Bladder Brain Colon Kidney Muscle Ovary Placenta Testis
ENST00000618808 0.273±0.00 3.067±0.00 0.278±0.00 0.061±0.00 0.365±0.00 0.044±0.00 0.003±0.00 0.051±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003NW CIL_0003NW_0001 CGP 2:140231423-143055832

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005509 IEA calcium ion binding
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000052550 Lrp1b-001 protein_coding Mus_musculus 0 15580
ENSMUST00000167270 Lrp1b-201 protein_coding Mus_musculus 0 12060
ENSDART00000139033 lrp1bb-001 protein_coding Danio_rerio 0 2728
ENSMUST00000142546 Lrp1b-002 protein_coding Mus_musculus 0 2569
ENSMUST00000138700 Lrp1b-007 retained_intron Mus_musculus 0 1664
ENSMUST00000134032 Lrp1b-004 retained_intron Mus_musculus 0 599

Loading