C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: SAM domain, SH3 domain and nuclear localization signals 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000619120 SAMSN1-201 ENSG00000155307 9606 - 21:14485229-14546360 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainBreastHeartLiverLungENST00000619120
Transcript ID Brain Breast Heart Liver Lung
ENST00000619120 0.486±0.00 1.221±0.00 0.090±0.00 0.203±0.00 1.767±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000MS CIL_0000MS_0002 CGP 21:14371115-14583402

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IEA protein binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114239 Samsn1-003 protein_coding Mus_musculus 0 983
ENSMUST00000114240 Samsn1-001 protein_coding Mus_musculus 0 981
ENSMUST00000147447 Samsn1-006 retained_intron Mus_musculus 0 235
ENSMUST00000139691 Samsn1-004 retained_intron Mus_musculus 0 235

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