C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: Alstrom syndrome 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000620466 ALMS1-004 ENSG00000116127 9606 + 2:73452725-73603859 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000620466
Transcript ID Adipose Adrenal Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000620466 0.512±0.00 0.576±0.00 0.309±0.00 0.339±0.00 0.195±0.00 0.516±0.00 0.245±0.00 0.604±0.00 2.249±0.61 0.561±0.30 8.161±3.58

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003EB CIL_0003EB_0001 CGP 2:73290929-73610793
CIL_0000LA CIL_0000LA_0001 CGP 2:73385758-73642393

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000072018 Alms1-001 protein_coding Mus_musculus 0 2350

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