C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: collagen, type IV, alpha 6
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621266 COL4A6-204 ENSG00000197565 9606 - X:108155608-108438430 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartOvaryPlacentaENST00000621266
Transcript ID Brain Heart Ovary Placenta
ENST00000621266 0.121±0.00 0.667±0.25 0.277±0.00 0.271±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006JL CIL_0006JL_0001 CGP X:108091668-108439497
CIL_000172 CIL_000172_0002 CGP X:108155607-108697545

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005201 IEA extracellular matrix structural constituent
GO:0005581 IEA collagen trimer

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000101205 Col4a6-001 protein_coding Mus_musculus 0 2868

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