C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: family with sequence similarity 3, member A
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621967 FAM3A-002 ENSG00000071889 9606 - X:154506171-154516242 nonsense_mediated_decay

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonOvaryPlacentaTestisENST00000621967
Transcript ID Adipose Brain Breast Colon Ovary Placenta Testis
ENST00000621967 2.958±0.00 0.641±0.00 3.262±0.00 2.944±0.00 8.045±0.00 2.316±0.00 4.039±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LG CIL_0003LG_0001 CGP X:154487306-154516242

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000114139 Fam3a-010 protein_coding Mus_musculus 0 658
ENSMUST00000114142 Fam3a-006 protein_coding Mus_musculus 0 654
ENSMUST00000015427 Fam3a-007 protein_coding Mus_musculus 0 654
ENSMUST00000114143 Fam3a-001 protein_coding Mus_musculus 0 654
ENSMUST00000114141 Fam3a-008 protein_coding Mus_musculus 0 564
ENSMUST00000122894 Fam3a-002 protein_coding Mus_musculus 0 549
ENSMUST00000149218 Fam3a-011 nonsense_mediated_decay Mus_musculus 0 359
ENSMUST00000114138 Fam3a-005 protein_coding Mus_musculus 0 296
ENSMUST00000136716 Fam3a-003 retained_intron Mus_musculus 0 226
ENSMUST00000141604 Fam3a-004 nonsense_mediated_decay Mus_musculus 1e-39 169

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