C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: sorting nexin 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000622277 SNX12-202 ENSG00000147164 9606 - X:71059249-71073426 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002B5 CIL_0002B5_0001 CGP X:70925582-71073426
CIL_00009X CIL_00009X_0001 CGP X:71056332-71103535

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005515 IPI protein binding
GO:0005768 IBA endosome
GO:0005769 IDA early endosome
GO:0006886 IBA intracellular protein transport
GO:0010629 IMP negative regulation of gene expression
GO:0010955 IDA negative regulation of protein processing
GO:0016020 IEA membrane
GO:0019899 IPI enzyme binding
GO:0030100 IMP regulation of endocytosis
GO:0035091 IBA:IEA phosphatidylinositol binding
GO:0042177 IDA negative regulation of protein catabolic process
GO:0051224 IDA negative regulation of protein transport
GO:0070062 IDA extracellular vesicular exosome
GO:2000642 IDA negative regulation of early endosome to late endosome transport

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000120389 Snx12-002 protein_coding Mus_musculus 0 1587
ENSMUST00000077876 Snx12-001 protein_coding Mus_musculus 0 756
ENSMUST00000156473 Snx12-003 protein_coding Mus_musculus 0 756
ENSMUST00000130826 Snx12-005 processed_transcript Mus_musculus 0 726

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