C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zinc finger protein 525
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000624073 ZNF525-201 ENSG00000203326 9606 + 19:53330675-53386388 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartLiverLungMuscleTestisENST00000624073
Transcript ID Adipose Adrenal Brain Breast Colon Heart Liver Lung Muscle Testis
ENST00000624073 33.300±0.00 38.199±0.00 8.396±0.00 17.115±0.00 42.993±0.00 9.252±0.00 13.700±0.00 32.108±0.00 18.716±0.00 20.244±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004HA CIL_0004HA_0001 CGP 19:53330675-53392217

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003735 IEA structural constituent of ribosome
GO:0005622 IEA intracellular
GO:0005840 IEA ribosome
GO:0006412 IEA translation

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000121292 Rpl39l-002 protein_coding Mus_musculus 0 189
ENSMUST00000044103 Rpl39l-001 protein_coding Mus_musculus 0 189
ENSMUST00000117602 Gm15148-001 processed_pseudogene Mus_musculus 8.00001e-41 169
ENSMUST00000115231 Rpl39-001 protein_coding Mus_musculus 3e-40 167
ENSMUST00000142604 Rpl39-ps-002 processed_transcript Mus_musculus 1e-38 161
ENSMUST00000146505 Rpl39-ps-001 transcribed_processed_pseudogene Mus_musculus 6e-37 156
ENSMUST00000121971 Gm12013-001 processed_pseudogene Mus_musculus 2e-36 154
ENSMUST00000191066 RP23-127L14.1-001 processed_pseudogene Mus_musculus 4e-34 147
ENSMUST00000118985 Gm14541-001 processed_pseudogene Mus_musculus 6e-32 139
ENSMUST00000118637 Gm11694-001 processed_pseudogene Mus_musculus 8e-31 135
ENSMUST00000119534 Gm15067-001 processed_pseudogene Mus_musculus 3e-30 134
ENSMUST00000138799 Rpl39-002 retained_intron Mus_musculus 5e-28 126

Loading