C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: 5-hydroxytryptamine (serotonin) receptor 7 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000624664 HTR7P1-002 ENSG00000183935 9606 + 12:13000420-13004830 TEC

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000624664
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000624664 1.488±0.00 2.667±0.00 0.186±0.00 0.934±0.04 0.733±0.62 0.197±0.03 0.186±0.07 0.984±0.05 0.432±0.09 0.278±0.12 0.056±0.00 1.050±0.47 1.477±0.65 0.885±0.02

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DR CIL_0000DR_0001 CGP 12:12974864-13142521

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000164639 Htr7-001 protein_coding Mus_musculus 0 1646
ENSMUST00000166074 Htr7-005 protein_coding Mus_musculus 0 1622
ENSMUST00000099505 Htr7-006 protein_coding Mus_musculus 0 1315
ENSMUST00000165215 Htr7-002 nonsense_mediated_decay Mus_musculus 0 1053
ENSMUST00000164781 Htr7-004 nonsense_mediated_decay Mus_musculus 0 1031
ENSMUST00000170360 Htr7-003 nonsense_mediated_decay Mus_musculus 0 773

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