C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: DNA segment, Chr 1, Pasteur Institute 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000039224 D1Pas1 10090 + 1:186967416-186970627 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000045108 D1Pas1-001 186967416-186970627 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000045108
Transcript ID Bladder Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000045108 0.007±0.00 0.008±0.00 0.018±0.00 0.023±0.00 0.032±0.01 0.008±0.00 0.017±0.00 0.112±0.06 60.815±29.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00086U CIL_00086U_0002 VISTA 1:186608316-187210077
CIL_00086S CIL_00086S_0002 VISTA 1:186622310-187223505
CIL_0007JY CIL_0007JY_0002 UCNEbase 1:186701249-188943182
CIL_000994 CIL_000994_0002 VISTA 1:186948277-187549469

Gene Ontology
GO IDEvidence TypeGO Description
GO:0003677 IEA DNA binding
GO:0003723 IEA RNA binding
GO:0005524 IEA ATP binding
GO:0006200 IEA ATP catabolic process
GO:0007275 IEA multicellular organismal development
GO:0007283 IEA spermatogenesis
GO:0008026 IEA ATP-dependent helicase activity
GO:0030154 IEA cell differentiation

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000005774 pl10 pl10 protein_coding Danio_rerio
ENSDARG00000020573 ddx3 DEAD (Asp-Glu-Ala-Asp) box polypeptide 3 protein_coding Danio_rerio
ENSG00000215301 DDX3X DEAD (Asp-Glu-Ala-Asp) box helicase 3, X-linked protein_coding Homo_sapiens

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