C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: glyceraldehyde-3-phosphate dehydrogenase
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000147739 gapdh-002 ENSDARG00000043457 7955 - 16:19255690-19261820 protein_coding

Danio rerio EnsemblZv9

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

No expression data.

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0016620 IEA oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000074758 Gapdhs-003 protein_coding Mus_musculus 0 195
ENSMUST00000086739 Gm10566-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000118655 Gm12182-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000121923 Gm4908-001 processed_pseudogene Mus_musculus 0 281
ENSMUST00000122085 Gm15593-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000180415 Gm5523-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000182067 Gapdhs-002 nonsense_mediated_decay Mus_musculus 5e-19 99
ENSMUST00000182565 Gm8825-001 processed_pseudogene Mus_musculus 0 366
ENSMUST00000182634 Gapdhs-001 protein_coding Mus_musculus 0 195
ENSMUST00000182754 Gm8330-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000182832 Gm7734-001 processed_pseudogene Mus_musculus 0 320
ENSMUST00000182995 Gm5335-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000183020 Gm5710-001 processed_pseudogene Mus_musculus 0 331
ENST00000222286 GAPDHS-001 protein_coding Homo_sapiens 4e-28 130

Loading