C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0006DX_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052769-ENSDARG00000052765 CGP 7955 14:36912246-37033972
GeneTranscriptPositionBiotype
ENSDARG00000052765 (gria2b)
glutamate receptor, ionotropic, AMPA 2b 		ENSDART00000064617 (gria2b-001) 36968744-37033972 protein_coding
ENSDART00000074671 (gria2b-002) 36968780-37032629 protein_coding
ENSDART00000134602 (gria2b-003) 37026699-37030817 processed_transcript
ENSDART00000147856 (gria2b-004) 37030364-37032576 processed_transcript
ENSDARG00000052769 (glrbb)
glycine receptor, beta b 		ENSDART00000074685 (glrbb-201) 36912246-36952579 protein_coding
ENSDART00000132907 (glrbb-001) 36912248-36952579 protein_coding
CIL_0006DX_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000109738-ENSG00000120251 CGP 9606 4:157076057-157366075
GeneTranscriptPositionBiotype
ENSG00000109738 (GLRB)
glycine receptor, beta 		ENST00000264428 (GLRB-001) 157076057-157172090 protein_coding
ENST00000506411 (GLRB-003) 157076204-157138872 nonsense_mediated_decay
ENST00000509282 (GLRB-002) 157076403-157170806 protein_coding
ENST00000510970 (GLRB-006) 157136365-157138900 retained_intron
ENST00000512619 (GLRB-005) 157076195-157170905 protein_coding
ENST00000515642 (GLRB-004) 157076166-157136511 nonsense_mediated_decay
ENST00000541722 (GLRB-201) 157076125-157172090 protein_coding
ENSG00000120251 (GRIA2)
glutamate receptor, ionotropic, AMPA 2 		ENST00000264426 (GRIA2-002) 157220764-157363945 protein_coding
ENST00000296526 (GRIA2-001) 157220718-157366075 protein_coding
ENST00000323661 (GRIA2-006) 157221242-157362821 nonsense_mediated_decay
ENST00000393815 (GRIA2-004) 157220668-157366069 protein_coding
ENST00000471736 (GRIA2-003) 157220724-157364287 retained_intron
ENST00000503437 (GRIA2-014) 157249464-157317686 protein_coding
ENST00000503980 (GRIA2-013) 157360700-157362934 retained_intron
ENST00000504801 (GRIA2-007) 157204182-157303705 processed_transcript
ENST00000505888 (GRIA2-011) 157221598-157312786 protein_coding
ENST00000506284 (GRIA2-010) 157220807-157303634 protein_coding
ENST00000507898 (GRIA2-005) 157220143-157363684 protein_coding
ENST00000509417 (GRIA2-009) 157220691-157303696 protein_coding
ENST00000510854 (GRIA2-012) 157341429-157363164 protein_coding
ENST00000512774 (GRIA2-008) 157219903-157221723 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DX_0001ENSDARG00000052765ENSDART00000064617ENSDART00000074671ENSDART00000134602ENSDART00000147856ENSDARG00000052769ENSDART00000074685ENSDART00000132907CIL_0006DX_0002ENSG00000109738ENST00000264428ENST00000506411ENST00000509282ENST00000510970ENST00000512619ENST00000515642ENST00000541722ENSG00000120251ENST00000264426ENST00000296526ENST00000323661ENST00000393815ENST00000471736ENST00000503437ENST00000503980ENST00000504801ENST00000505888ENST00000506284ENST00000507898ENST00000509417ENST00000510854ENST00000512774
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0006DX_0001ENSDARG00000052765ENSDART00000064617ENSDART00000074671ENSDART00000147856ENSDARG00000052769ENSDART00000074685ENSDART00000132907CIL_0006DX_0002ENSG00000109738ENST00000264428ENST00000506411ENST00000509282ENST00000510970ENST00000512619ENST00000515642ENST00000541722ENSG00000120251ENST00000264426ENST00000296526ENST00000323661ENST00000393815ENST00000471736ENST00000503437ENST00000504801ENST00000505888ENST00000506284ENST00000507898ENST00000509417ENST00000510854
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052765 ENSDART00000064617 N/A N/A N/A 81.075±17.48 N/A N/A N/A 0.033±0.00 0.036±0.00 N/A 2.453±0.00 N/A N/A N/A
ENSDART00000074671 N/A N/A N/A 37.908±11.10 N/A N/A N/A 0.161±0.12 N/A N/A 1.519±0.00 N/A N/A N/A
ENSDART00000134602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147856 N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A
ENSDARG00000052769 ENSDART00000074685 N/A N/A N/A 49.285±0.56 N/A N/A N/A N/A N/A N/A 2.361±0.00 N/A N/A N/A
ENSDART00000132907 N/A N/A N/A 8.171±0.07 N/A N/A 0.059±0.00 0.201±0.17 0.047±0.00 N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000109738 ENST00000264428 0.054±0.00 0.716±0.00 N/A 13.361±4.61 N/A 1.002±0.00 0.197±0.00 N/A 0.298±0.20 N/A 0.049±0.00 0.247±0.18 0.136±0.06 0.259±0.09
ENST00000506411 N/A N/A 0.310±0.00 N/A 0.179±0.00 0.601±0.00 0.640±0.00 0.245±0.00 N/A N/A N/A N/A N/A N/A
ENST00000509282 0.179±0.00 1.005±0.00 N/A 14.580±0.00 1.381±0.00 0.997±0.00 0.921±0.76 0.561±0.00 N/A 0.441±0.24 0.182±0.00 0.463±0.25 0.774±0.18 0.421±0.04
ENST00000510970 N/A N/A 0.558±0.00 N/A N/A N/A N/A N/A N/A 1.315±0.00 0.385±0.00 0.107±0.00 N/A N/A
ENST00000512619 N/A N/A N/A N/A N/A N/A N/A N/A 0.274±0.00 0.833±0.00 N/A N/A 0.419±0.00 N/A
ENST00000515642 0.324±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.393±0.00 N/A N/A N/A N/A
ENST00000541722 0.066±0.00 N/A N/A N/A 0.362±0.00 0.289±0.00 0.504±0.00 0.412±0.00 0.126±0.00 0.263±0.00 N/A 0.059±0.00 0.174±0.00 0.374±0.00
ENSG00000120251 ENST00000264426 0.018±0.00 N/A N/A 15.251±1.20 N/A N/A N/A 0.046±0.00 N/A N/A N/A 0.233±0.18 N/A 0.212±0.00
ENST00000296526 N/A N/A N/A 10.539±4.43 N/A N/A N/A N/A N/A N/A 0.089±0.00 0.091±0.00 N/A 0.079±0.00
ENST00000323661 N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393815 N/A 0.012±0.00 0.136±0.00 9.872±0.00 0.007±0.00 N/A N/A 0.044±0.00 N/A 0.076±0.00 N/A 0.088±0.00 0.048±0.00 0.099±0.00
ENST00000471736 N/A N/A N/A 12.508±0.00 0.038±0.00 N/A 0.014±0.00 N/A 0.307±0.00 N/A N/A 0.029±0.00 N/A 0.076±0.00
ENST00000503437 N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A 1.971±0.00 N/A 0.101±0.00 1.028±0.00
ENST00000503980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504801 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.788±0.00 N/A N/A N/A N/A
ENST00000505888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.123±0.00 N/A N/A
ENST00000506284 N/A N/A N/A N/A 0.227±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507898 N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.277±0.00
ENST00000509417 N/A N/A 1.288±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510854 0.073±0.00 0.102±0.00 N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.656±0.00
ENST00000512774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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