C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00007X_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000052765-ENSDARG00000077054 CGP 7955 14:36968744-37103245
GeneTranscriptPositionBiotype
ENSDARG00000052765 (gria2b)
glutamate receptor, ionotropic, AMPA 2b 		ENSDART00000064617 (gria2b-001) 36968744-37033972 protein_coding
ENSDART00000074671 (gria2b-002) 36968780-37032629 protein_coding
ENSDART00000134602 (gria2b-003) 37026699-37030817 processed_transcript
ENSDART00000147856 (gria2b-004) 37030364-37032576 processed_transcript
ENSDARG00000077054 (fam198b)
family with sequence similarity 198, member B 		ENSDART00000112379 (fam198b-201) 37097650-37103245 protein_coding
CIL_00007X_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000120251-ENSG00000164125 CGP 9606 4:157204182-158173318
GeneTranscriptPositionBiotype
ENSG00000120251 (GRIA2)
glutamate receptor, ionotropic, AMPA 2 		ENST00000264426 (GRIA2-002) 157220764-157363945 protein_coding
ENST00000296526 (GRIA2-001) 157220718-157366075 protein_coding
ENST00000323661 (GRIA2-006) 157221242-157362821 nonsense_mediated_decay
ENST00000393815 (GRIA2-004) 157220668-157366069 protein_coding
ENST00000471736 (GRIA2-003) 157220724-157364287 retained_intron
ENST00000503437 (GRIA2-014) 157249464-157317686 protein_coding
ENST00000503980 (GRIA2-013) 157360700-157362934 retained_intron
ENST00000504801 (GRIA2-007) 157204182-157303705 processed_transcript
ENST00000505888 (GRIA2-011) 157221598-157312786 protein_coding
ENST00000506284 (GRIA2-010) 157220807-157303634 protein_coding
ENST00000507898 (GRIA2-005) 157220143-157363684 protein_coding
ENST00000509417 (GRIA2-009) 157220691-157303696 protein_coding
ENST00000510854 (GRIA2-012) 157341429-157363164 protein_coding
ENST00000512774 (GRIA2-008) 157219903-157221723 protein_coding
ENSG00000164125 (FAM198B)
family with sequence similarity 198, member B 		ENST00000296530 (FAM198B-004) 158124604-158172736 protein_coding
ENST00000393807 (FAM198B-002) 158124854-158173050 protein_coding
ENST00000585682 (FAM198B-001) 158124474-158173050 protein_coding
ENST00000587787 (FAM198B-006) 158171349-158173318 protein_coding
ENST00000589306 (FAM198B-007) 158130800-158173023 processed_transcript
ENST00000590648 (FAM198B-008) 158127522-158159681 protein_coding
ENST00000592057 (FAM198B-003) 158168354-158173046 protein_coding
ENST00000592586 (FAM198B-010) 158127545-158167212 protein_coding
ENST00000593260 (FAM198B-009) 158130786-158170378 protein_coding
ENSG00000234111 (RP11-364P22.1)
 ENST00000455598 (RP11-364P22.1-002) 157572536-157575824 lincRNA
ENST00000507108 (RP11-364P22.1-001) 157572490-157576154 lincRNA
ENST00000509450 (RP11-364P22.1-003) 157572536-157575824 lincRNA
ENSG00000248429 (RP11-597D13.9)
 ENST00000503611 (RP11-597D13.9-001) 158170752-158202877 antisense
ENST00000505532 (RP11-597D13.9-004) 158171373-158200913 antisense
ENST00000508752 (RP11-597D13.9-002) 158176307-158200913 antisense
ENST00000509463 (RP11-597D13.9-007) 158171228-158199451 antisense
ENST00000514381 (RP11-597D13.9-003) 158172577-158179926 antisense
ENSG00000249275 (RP11-364P22.2)
 ENST00000507296 (RP11-364P22.2-001) 157637687-157667044 lincRNA
ENSG00000249627 (RP11-312A15.1)
 ENST00000508460 (RP11-312A15.1-001) 157815010-157815480 processed_pseudogene
ENSG00000250475 (RP11-312A15.3)
 ENST00000513850 (RP11-312A15.3-001) 157968412-157969615 unprocessed_pseudogene
ENSG00000279139 (RP11-597D13.1)
 ENST00000624241 (RP11-597D13.1-001) 158109500-158110153 TEC
ENSG00000279994 (RP11-312A15.2)
 ENST00000624526 (RP11-312A15.2-001) 157945817-157946642 TEC
ENSG00000280140 (RP11-597D13.2)
 ENST00000624394 (RP11-597D13.2-001) 158111361-158111931 TEC

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00007X_0001ENSDARG00000052765ENSDART00000064617ENSDART00000074671ENSDART00000134602ENSDART00000147856ENSDARG00000077054ENSDART00000112379CIL_00007X_0002ENSG00000120251ENST00000264426ENST00000296526ENST00000323661ENST00000393815ENST00000471736ENST00000503437ENST00000503980ENST00000504801ENST00000505888ENST00000506284ENST00000507898ENST00000509417ENST00000510854ENST00000512774ENSG00000164125ENST00000296530ENST00000393807ENST00000585682ENST00000587787ENST00000589306ENST00000590648ENST00000592057ENST00000592586ENST00000593260ENSG00000234111ENST00000455598ENST00000507108ENST00000509450ENSG00000248429ENST00000503611ENST00000505532ENST00000508752ENST00000509463ENST00000514381ENSG00000249275ENST00000507296ENSG00000249627ENST00000508460ENSG00000250475ENST00000513850ENSG00000279139ENST00000624241ENSG00000279994ENST00000624526ENSG00000280140ENST00000624394
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00007X_0001ENSDARG00000052765ENSDART00000064617ENSDART00000074671ENSDART00000147856ENSDARG00000077054ENSDART00000112379CIL_00007X_0002ENSG00000120251ENST00000264426ENST00000296526ENST00000323661ENST00000393815ENST00000471736ENST00000503437ENST00000504801ENST00000505888ENST00000506284ENST00000507898ENST00000509417ENST00000510854ENSG00000164125ENST00000296530ENST00000393807ENST00000585682ENSG00000234111ENST00000455598ENST00000507108ENST00000509450ENSG00000248429ENST00000503611ENSG00000249275ENST00000507296ENSG00000249627ENST00000508460ENSG00000250475ENST00000513850ENSG00000279139ENST00000624241ENSG00000279994ENST00000624526ENSG00000280140ENST00000624394
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000052765 ENSDART00000064617 N/A N/A N/A 81.075±17.48 N/A N/A N/A 0.033±0.00 0.036±0.00 N/A 2.453±0.00 N/A N/A N/A
ENSDART00000074671 N/A N/A N/A 37.908±11.10 N/A N/A N/A 0.161±0.12 N/A N/A 1.519±0.00 N/A N/A N/A
ENSDART00000134602 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147856 N/A N/A N/A N/A N/A N/A N/A N/A 0.096±0.00 N/A N/A N/A N/A N/A
ENSDARG00000077054 ENSDART00000112379 N/A N/A N/A 0.357±0.24 N/A N/A 2.796±0.60 2.570±0.00 N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000120251 ENST00000264426 0.018±0.00 N/A N/A 15.251±1.20 N/A N/A N/A 0.046±0.00 N/A N/A N/A 0.233±0.18 N/A 0.212±0.00
ENST00000296526 N/A N/A N/A 10.539±4.43 N/A N/A N/A N/A N/A N/A 0.089±0.00 0.091±0.00 N/A 0.079±0.00
ENST00000323661 N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000393815 N/A 0.012±0.00 0.136±0.00 9.872±0.00 0.007±0.00 N/A N/A 0.044±0.00 N/A 0.076±0.00 N/A 0.088±0.00 0.048±0.00 0.099±0.00
ENST00000471736 N/A N/A N/A 12.508±0.00 0.038±0.00 N/A 0.014±0.00 N/A 0.307±0.00 N/A N/A 0.029±0.00 N/A 0.076±0.00
ENST00000503437 N/A N/A N/A N/A N/A N/A 0.030±0.00 N/A N/A N/A 1.971±0.00 N/A 0.101±0.00 1.028±0.00
ENST00000503980 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000504801 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.788±0.00 N/A N/A N/A N/A
ENST00000505888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.123±0.00 N/A N/A
ENST00000506284 N/A N/A N/A N/A 0.227±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000507898 N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.277±0.00
ENST00000509417 N/A N/A 1.288±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000510854 0.073±0.00 0.102±0.00 N/A N/A 0.119±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.656±0.00
ENST00000512774 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000164125 ENST00000296530 N/A N/A N/A N/A N/A N/A N/A N/A 0.251±0.00 2.106±0.00 0.408±0.00 N/A N/A N/A
ENST00000393807 N/A 1.901±0.00 N/A N/A 7.866±0.00 4.887±0.00 5.630±0.00 N/A N/A N/A 0.337±0.00 N/A N/A N/A
ENST00000585682 1.683±0.00 N/A 0.545±0.00 N/A 6.011±0.30 2.061±0.00 3.696±0.06 1.787±0.00 2.214±0.00 1.349±0.00 N/A 12.850±1.91 2.672±0.41 N/A
ENST00000587787 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000589306 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000590648 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592057 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000592586 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000593260 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000234111 ENST00000455598 N/A N/A N/A 0.058±0.00 N/A N/A 0.074±0.00 N/A N/A N/A N/A N/A 0.035±0.00 N/A
ENST00000507108 N/A N/A N/A N/A 0.009±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509450 0.018±0.00 N/A N/A 0.327±0.09 0.221±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.071±0.00
ENSG00000248429 ENST00000503611 N/A N/A N/A N/A N/A N/A N/A 0.280±0.00 3.469±0.00 N/A N/A N/A N/A N/A
ENST00000505532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000508752 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000509463 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000514381 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000249275 ENST00000507296 0.154±0.00 0.567±0.00 0.075±0.00 0.112±0.00 0.297±0.13 N/A 0.117±0.05 0.129±0.00 0.059±0.02 0.129±0.00 0.430±0.31 0.088±0.03 N/A 0.339±0.03
ENSG00000249627 ENST00000508460 N/A N/A N/A 0.236±0.00 N/A N/A N/A N/A 0.026±0.00 N/A N/A N/A N/A N/A
ENSG00000250475 ENST00000513850 N/A 0.015±0.00 N/A N/A 0.089±0.00 N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A 0.110±0.00
ENSG00000279139 ENST00000624241 N/A N/A N/A N/A 0.017±0.00 N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A
ENSG00000279994 ENST00000624526 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.031±0.00 N/A N/A
ENSG00000280140 ENST00000624394 N/A N/A N/A 0.195±0.15 0.406±0.00 0.153±0.00 0.075±0.00 N/A N/A N/A N/A 0.235±0.15 N/A N/A

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