C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: insulin-like growth factor 2 mRNA binding protein 2
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000457616 IGF2BP2-008 ENSG00000073792 9606 - 3:185643975-185825012 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastLiverOvaryPlacentaTestisENST00000457616
Transcript ID Adipose Adrenal Brain Breast Liver Ovary Placenta Testis
ENST00000457616 0.796±0.00 0.369±0.00 0.043±0.00 0.812±0.00 0.094±0.00 100.874±0.00 7.456±0.00 4.020±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0008ZT CIL_0008ZT_0001 VISTA 3:185444884-186046681
CIL_0006RH CIL_0006RH_0001 CGP 3:185582496-185825056
CIL_0003YC CIL_0003YC_0002 CGP 3:185643739-185938136

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0003676 IEA nucleic acid binding
GO:0003723 IEA RNA binding
GO:0003729 IEA mRNA binding

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000100052 Igf2bp2-001 protein_coding Mus_musculus 0 3459
ENSMUST00000134188 Igf2bp2-009 retained_intron Mus_musculus 0 2983
ENSMUST00000115379 Igf2bp2-004 protein_coding Mus_musculus 0 2854
ENSMUST00000129913 Igf2bp2-003 retained_intron Mus_musculus 0 1829
ENSMUST00000125926 Igf2bp2-005 processed_transcript Mus_musculus 0 446
ENSMUST00000127696 Igf2bp2-002 retained_intron Mus_musculus 0 422
ENSMUST00000146885 Igf2bp2-006 retained_intron Mus_musculus 0 309
ENSMUST00000124318 Igf2bp2-007 retained_intron Mus_musculus 0 298
ENSMUST00000151087 Igf2bp2-008 processed_transcript Mus_musculus 6e-30 137

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