C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: chromosome 20 open reading frame 27
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000101220 C20orf27 9606 - 20:3753508-3768387 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000217195 C20orf27-002 3753508-3767728 protein_coding
  ENST00000379772 C20orf27-001 3753508-3768387 protein_coding
  ENST00000399672 C20orf27-005 3753508-3767781 protein_coding
  ENST00000399683 C20orf27-004 3753508-3758678 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000217195ENST00000379772ENST00000399672ENST00000399683
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000217195 11.740±0.00 11.668±0.00 0.234±0.00 2.924±0.00 11.078±0.00 29.482±0.00 1.501±1.33 4.664±0.00 1.347±0.00 2.790±0.00 2.735±0.00 17.501±5.10 8.840±1.39 6.329±0.20
ENST00000379772 N/A N/A 0.289±0.00 N/A N/A N/A 1.397±0.00 0.890±0.00 0.663±0.00 0.158±0.00 0.446±0.00 50.703±0.00 3.325±0.00 N/A
ENST00000399672 2.938±0.00 3.845±0.00 N/A 2.404±1.23 3.716±3.29 4.438±4.19 0.270±0.00 2.075±0.00 0.234±0.00 2.625±0.00 0.904±0.00 2.906±2.14 3.128±0.02 3.320±1.22
ENST00000399683 7.966±0.00 18.726±0.00 N/A 5.568±2.09 15.612±0.00 13.096±0.00 1.856±0.00 1.625±1.02 2.897±1.19 1.309±0.00 3.058±0.00 12.606±2.24 4.335±1.66 9.715±0.82

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033D CIL_00033D_0001 CGP 20:3753508-3781448

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000076239 C7H20orf27 (1 of 2) chromosome 20 open reading frame 27 protein_coding Danio_rerio
ENSDARG00000087426 C1H20orf27 (2 of 2) chromosome 20 open reading frame 27 protein_coding Danio_rerio
ENSMUSG00000027327 1700037H04Rik RIKEN cDNA 1700037H04 gene protein_coding Mus_musculus

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