C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 20 open reading frame 27
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000379772 C20orf27-001 ENSG00000101220 9606 - 20:3753508-3768387 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderHeartKidneyLiverLungMuscleOvaryPlacentaENST00000379772
Transcript ID Bladder Heart Kidney Liver Lung Muscle Ovary Placenta
ENST00000379772 0.289±0.00 1.397±0.00 0.890±0.00 0.663±0.00 0.158±0.00 0.446±0.00 50.703±0.00 3.325±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00033D CIL_00033D_0001 CGP 20:3753508-3781448

Gene Ontology

GO IDEvidence TypeGO Description
GO:0003674 ND molecular_function
GO:0005575 ND cellular_component
GO:0008150 ND biological_process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000103188 1700037H04Rik-001 protein_coding Mus_musculus 0 839
ENSMUST00000028800 1700037H04Rik-002 protein_coding Mus_musculus 0 671
ENSMUST00000136838 1700037H04Rik-004 retained_intron Mus_musculus 0 573
ENSMUST00000184535 1700037H04Rik-003 nonsense_mediated_decay Mus_musculus 0 573
ENSMUST00000133602 1700037H04Rik-005 protein_coding Mus_musculus 0 551
ENSMUST00000184121 1700037H04Rik-006 nonsense_mediated_decay Mus_musculus 0 429

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