C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: chromosome 11 open reading frame 58
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000525684 C11orf58-006 ENSG00000110696 9606 + 11:16738658-16755067 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainColonKidneyLiverLungOvaryPlacentaTestisENST00000525684
Transcript ID Bladder Brain Colon Kidney Liver Lung Ovary Placenta Testis
ENST00000525684 33.111±0.00 87.078±0.00 28.827±0.00 22.208±0.00 41.588±0.00 40.417±15.49 34.924±0.00 35.654±0.00 42.250±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZR CIL_0003ZR_0001 CGP 11:15112424-16739591
CIL_00081X CIL_00081X_0001 VISTA 11:16056231-16657544
CIL_0008LR CIL_0008LR_0001 VISTA 11:16101723-16704491
CIL_000836 CIL_000836_0001 VISTA 11:16591589-17196198
CIL_0003ZQ CIL_0003ZQ_0001 CGP 11:16613132-17014443

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000032899 1110004F10Rik-001 protein_coding Mus_musculus 0 270
ENSMUST00000151254 1110004F10Rik-003 nonsense_mediated_decay Mus_musculus 0 255
ENSMUST00000106608 1110004F10Rik-004 protein_coding Mus_musculus 0 255
ENSMUST00000106607 1110004F10Rik-002 protein_coding Mus_musculus 0 254
ENSMUST00000182930 Gm9169-001 processed_pseudogene Mus_musculus 0 224

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