C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: chromosome 11 open reading frame 58
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000531658 C11orf58-003 ENSG00000110696 9606 + 11:16749114-16755347 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungENST00000531658
Transcript ID Breast Lung
ENST00000531658 5.707±0.00 4.684±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003ZR CIL_0003ZR_0001 CGP 11:15112424-16739591
CIL_00081X CIL_00081X_0001 VISTA 11:16056231-16657544
CIL_0008LR CIL_0008LR_0001 VISTA 11:16101723-16704491
CIL_000836 CIL_000836_0001 VISTA 11:16591589-17196198
CIL_0003ZQ CIL_0003ZQ_0001 CGP 11:16613132-17014443

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000151254 1110004F10Rik-003 nonsense_mediated_decay Mus_musculus 0 667
ENSMUST00000106608 1110004F10Rik-004 protein_coding Mus_musculus 0 658
ENSMUST00000032899 1110004F10Rik-001 protein_coding Mus_musculus 0 658
ENSMUST00000106607 1110004F10Rik-002 protein_coding Mus_musculus 0 654
ENSMUST00000182930 Gm9169-001 processed_pseudogene Mus_musculus 0 263

Loading