C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0003ZR_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000188487-ENSG00000110693 CGP 9606 11:15112424-16739591
GeneTranscriptPositionBiotype
ENSG00000110696 (C11orf58)
chromosome 11 open reading frame 58 		ENST00000228136 (C11orf58-001) 16738401-16756223 protein_coding
ENST00000524439 (C11orf58-004) 16738644-16754906 protein_coding
ENST00000524461 (C11orf58-002) 16746704-16755346 retained_intron
ENST00000524508 (C11orf58-009) 16756025-16756881 processed_transcript
ENST00000525106 (C11orf58-008) 16744236-16748196 retained_intron
ENST00000525256 (C11orf58-007) 16738659-16748591 retained_intron
ENST00000525684 (C11orf58-006) 16738658-16755067 protein_coding
ENST00000527893 (C11orf58-011) 16613132-16748421 processed_transcript
ENST00000528634 (C11orf58-005) 16738658-16754035 protein_coding
ENST00000531658 (C11orf58-003) 16749114-16755347 retained_intron
ENSG00000213785 (RP11-449L13.2)
 ENST00000525311 (RP11-449L13.2-001) 16484084-16484671 processed_pseudogene
ENSG00000241943 (RN7SL188P)
RNA, 7SL, cytoplasmic 188, pseudogene 		ENST00000469842 (RN7SL188P-201) 16576851-16577135 misc_RNA
ENSG00000254645 (RP11-396O20.2)
 ENST00000524613 (RP11-396O20.2-001) 15701963-15758898 lincRNA
ENSG00000254661 (RP11-222N13.1)
 ENST00000530418 (RP11-222N13.1-001) 15910957-15927443 lincRNA
ENSG00000254695 (RP11-396O20.1)
 ENST00000532242 (RP11-396O20.1-001) 15643885-15705368 lincRNA
ENSG00000254789 (RP11-531H8.2)
 ENST00000533082 (RP11-531H8.2-001) 15572023-15622391 lincRNA
ENSG00000254878 (CTD-3096P4.1)
 ENST00000531763 (CTD-3096P4.1-001) 16023190-16031515 antisense
ENSG00000254946 (RP11-531H8.1)
 ENST00000527770 (RP11-531H8.1-001) 15552855-15591098 lincRNA
CIL_0003ZR_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000048782-ENSMUSG00000051910 CGP 10090 7:114743694-116038744
GeneTranscriptPositionBiotype
ENSMUSG00000030664 (Sox6os)
SRY (sex determining region Y)-box 6, opposite strand 		ENSMUST00000032900 (Sox6os-001) 116031979-116032550 antisense
ENSMUSG00000046411 (Rps4l-ps)
ribosomal protein S4-like, pseudogene 		ENSMUST00000059737 (Rps4l-ps-001) 114926959-114927726 processed_pseudogene
ENSMUSG00000048782 (Insc)
inscuteable homolog (Drosophila) 		ENSMUST00000117543 (Insc-001) 114768736-114850376 protein_coding
ENSMUST00000136347 (Insc-003) 114771321-114791191 processed_transcript
ENSMUST00000136645 (Insc-002) 114745740-114791296 protein_coding
ENSMUST00000139670 (Insc-006) 114753721-114769345 retained_intron
ENSMUST00000150991 (Insc-004) 114792053-114850380 retained_intron
ENSMUST00000151464 (Insc-007) 114768774-114791055 protein_coding
ENSMUST00000161800 (Insc-008) 114743694-114791018 protein_coding
ENSMUST00000169913 (Insc-201) 114745766-114850380 protein_coding
ENSMUSG00000051910 (Sox6)
SRY (sex determining region Y)-box 6 		ENSMUST00000072804 (Sox6-201) 115471344-115995086 protein_coding
ENSMUST00000106612 (Sox6-202) 115471344-116031047 protein_coding
ENSMUST00000166207 (Sox6-203) 115476658-115846105 protein_coding
ENSMUST00000166877 (Sox6-204) 115471344-116038744 protein_coding
ENSMUST00000169129 (Sox6-205) 115474475-115824707 protein_coding
ENSMUSG00000077644 (Gm24982)
predicted gene, 24982 		ENSMUST00000104456 (Gm24982-201) 114832383-114832514 snoRNA

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZR_0001ENSG00000110696ENST00000228136ENST00000524439ENST00000524461ENST00000524508ENST00000525106ENST00000525256ENST00000525684ENST00000527893ENST00000528634ENST00000531658ENSG00000213785ENST00000525311ENSG00000241943ENST00000469842ENSG00000254645ENST00000524613ENSG00000254661ENST00000530418ENSG00000254695ENST00000532242ENSG00000254789ENST00000533082ENSG00000254878ENST00000531763ENSG00000254946ENST00000527770CIL_0003ZR_0002ENSMUSG00000030664ENSMUST00000032900ENSMUSG00000046411ENSMUST00000059737ENSMUSG00000048782ENSMUST00000117543ENSMUST00000136347ENSMUST00000136645ENSMUST00000139670ENSMUST00000150991ENSMUST00000151464ENSMUST00000161800ENSMUST00000169913ENSMUSG00000051910ENSMUST00000072804ENSMUST00000106612ENSMUST00000166207ENSMUST00000166877ENSMUST00000169129ENSMUSG00000077644ENSMUST00000104456
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0003ZR_0001ENSG00000110696ENST00000228136ENST00000524439ENST00000525684ENST00000531658ENSG00000213785ENST00000525311ENSG00000241943ENST00000469842ENSG00000254645ENST00000524613ENSG00000254661ENST00000530418ENSG00000254695ENST00000532242ENSG00000254789ENST00000533082ENSG00000254878ENST00000531763ENSG00000254946ENST00000527770CIL_0003ZR_0002ENSMUSG00000030664ENSMUST00000032900ENSMUSG00000046411ENSMUST00000059737ENSMUSG00000048782ENSMUST00000117543ENSMUST00000136645ENSMUST00000150991ENSMUST00000151464ENSMUST00000161800ENSMUST00000169913ENSMUSG00000051910ENSMUST00000072804ENSMUST00000106612ENSMUST00000166207ENSMUST00000166877ENSMUST00000169129ENSMUSG00000077644ENSMUST00000104456
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000110696 ENST00000228136 26.710±0.00 25.642±0.00 20.780±0.00 42.210±14.51 26.596±0.89 30.940±7.53 24.441±1.51 27.995±0.86 26.003±11.59 26.457±1.65 12.264±0.57 41.426±6.62 31.826±4.34 41.774±1.24
ENST00000524439 84.488±0.00 N/A N/A N/A N/A N/A N/A 52.382±0.00 N/A N/A N/A 113.683±0.00 147.721±0.00 154.971±0.00
ENST00000524461 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000524508 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525106 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525256 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000525684 N/A N/A 33.111±0.00 87.078±0.00 N/A 28.827±0.00 N/A 22.208±0.00 41.588±0.00 40.417±15.49 N/A 34.924±0.00 35.654±0.00 42.250±0.00
ENST00000527893 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000528634 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000531658 N/A N/A N/A N/A 5.707±0.00 N/A N/A N/A N/A 4.684±0.00 N/A N/A N/A N/A
ENSG00000213785 ENST00000525311 N/A N/A 0.103±0.00 N/A N/A 0.312±0.00 0.056±0.00 0.031±0.00 N/A N/A 0.026±0.00 N/A N/A 0.167±0.00
ENSG00000241943 ENST00000469842 N/A N/A 1.071±0.00 N/A N/A 0.507±0.00 N/A N/A N/A N/A N/A N/A N/A 0.137±0.00
ENSG00000254645 ENST00000524613 0.025±0.00 N/A N/A N/A N/A N/A N/A 0.051±0.00 N/A N/A N/A N/A N/A 0.016±0.00
ENSG00000254661 ENST00000530418 N/A N/A N/A 0.033±0.00 0.097±0.00 N/A N/A N/A N/A N/A N/A N/A 0.109±0.00 0.888±0.72
ENSG00000254695 ENST00000532242 N/A N/A N/A 0.046±0.00 N/A 0.118±0.00 0.075±0.00 3.828±0.00 N/A N/A N/A N/A 0.174±0.03 0.106±0.00
ENSG00000254789 ENST00000533082 0.124±0.00 N/A 0.632±0.00 N/A N/A N/A N/A 0.723±0.00 N/A 0.768±0.03 N/A 0.083±0.00 0.308±0.00 N/A
ENSG00000254878 ENST00000531763 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.586±0.00 0.423±0.17
ENSG00000254946 ENST00000527770 N/A N/A N/A N/A 0.133±0.00 N/A N/A N/A N/A 0.192±0.00 N/A N/A 0.494±0.32 0.290±0.07
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030664 ENSMUST00000032900 12.533±6.69 1.714±0.71 1.232±0.25 0.116±0.05 10.032±1.38 0.388±0.28 1.230±0.58 2.473±0.58 1.677±1.39 0.933±0.58 4.266±1.05 1.053±0.33 0.232±0.00 0.116±0.00
ENSMUSG00000046411 ENSMUST00000059737 N/A N/A 0.024±0.00 0.073±0.06 N/A N/A N/A 0.037±0.00 0.045±0.00 N/A N/A N/A 0.213±0.15 0.038±0.00
ENSMUSG00000048782 ENSMUST00000117543 0.145±0.07 0.504±0.03 N/A 0.231±0.03 0.213±0.13 0.559±0.20 0.122±0.05 0.333±0.00 2.901±1.50 0.174±0.09 0.174±0.07 0.925±0.35 3.437±2.40 1.064±0.25
ENSMUST00000136347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000136645 0.230±0.02 0.696±0.25 N/A 0.214±0.00 0.088±0.00 N/A 0.188±0.09 N/A N/A 0.195±0.01 0.159±0.11 1.211±0.38 N/A N/A
ENSMUST00000139670 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000150991 N/A N/A N/A N/A 0.188±0.01 N/A 0.177±0.00 2.584±0.16 1.569±0.00 0.083±0.00 0.156±0.10 0.693±0.26 N/A 0.227±0.00
ENSMUST00000151464 N/A N/A N/A N/A 0.445±0.00 N/A N/A N/A 17.487±0.00 N/A N/A N/A N/A N/A
ENSMUST00000161800 N/A N/A N/A N/A 0.294±0.00 N/A N/A N/A N/A N/A 0.191±0.01 N/A N/A N/A
ENSMUST00000169913 0.161±0.04 0.714±0.22 1.432±0.67 0.414±0.36 0.229±0.06 0.787±0.42 0.136±0.08 N/A N/A 0.392±0.00 0.099±0.00 0.734±0.43 N/A N/A
ENSMUSG00000051910 ENSMUST00000072804 N/A N/A N/A 0.865±0.00 N/A 0.238±0.08 N/A N/A 1.960±0.00 0.143±0.00 N/A 0.319±0.13 0.168±0.00 N/A
ENSMUST00000106612 N/A N/A N/A 0.557±0.00 0.188±0.00 N/A N/A N/A 0.735±0.32 0.077±0.00 N/A 0.355±0.00 N/A N/A
ENSMUST00000166207 N/A N/A N/A 2.003±0.00 N/A N/A N/A N/A N/A N/A N/A 0.368±0.25 0.240±0.00 16.894±16.22
ENSMUST00000166877 0.220±0.00 0.139±0.03 N/A 4.308±0.00 N/A 0.208±0.00 N/A N/A 5.011±0.00 0.103±0.00 N/A 0.348±0.03 0.186±0.13 1.958±0.41
ENSMUST00000169129 N/A 0.291±0.03 N/A N/A N/A N/A N/A N/A 0.338±0.00 N/A N/A 0.123±0.00 0.073±0.00 N/A
ENSMUSG00000077644 ENSMUST00000104456 N/A N/A N/A N/A N/A N/A N/A N/A 7.662±0.00 462.409±0.00 N/A N/A N/A N/A

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