C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: CAP, adenylate cyclase-associated protein, 2 (yeast)
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000112186 CAP2 9606 + 6:17393216-17557792 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000229922 CAP2-001 17393216-17557792 protein_coding
  ENST00000378990 CAP2-006 17393645-17556795 protein_coding
  ENST00000465994 CAP2-007 17393712-17556568 protein_coding
  ENST00000476263 CAP2-008 17393732-17539290 nonsense_mediated_decay
  ENST00000479291 CAP2-005 17393712-17551570 nonsense_mediated_decay
  ENST00000489374 CAP2-003 17393633-17556659 protein_coding
  ENST00000493172 CAP2-004 17393663-17556564 protein_coding
  ENST00000611958 CAP2-201 17393595-17557790 protein_coding
  ENST00000616440 CAP2-202 17393505-17557790 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000229922ENST00000378990ENST00000465994ENST00000476263ENST00000489374ENST00000493172ENST00000611958ENST00000616440
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000229922 0.365±0.00 N/A N/A 18.701±0.00 3.959±2.74 0.907±0.00 4.762±0.73 1.888±0.00 1.727±1.65 0.655±0.00 25.410±8.92 2.575±0.00 2.705±0.61 0.630±0.42
ENST00000378990 0.257±0.00 3.391±0.00 N/A 29.931±0.00 3.142±2.81 12.464±0.00 14.123±0.00 N/A N/A N/A 91.042±0.00 1.017±0.73 0.886±0.00 2.738±2.53
ENST00000465994 0.704±0.00 N/A N/A 19.854±0.00 0.835±0.00 0.643±0.00 4.389±0.00 0.098±0.00 4.344±0.00 0.221±0.00 25.741±0.00 1.029±0.00 1.529±0.00 0.596±0.00
ENST00000476263 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.180±0.00 N/A N/A N/A N/A
ENST00000489374 N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.135±0.00 N/A 0.971±0.00 N/A N/A
ENST00000493172 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.374±0.00 1.609±0.00 N/A
ENST00000611958 0.295±0.00 2.438±0.00 0.392±0.00 27.471±0.00 6.899±0.00 12.238±0.00 14.950±0.00 1.801±1.50 0.508±0.00 1.542±0.00 112.204±0.00 2.282±0.00 1.575±0.03 4.154±0.00
ENST00000616440 N/A 0.676±0.00 N/A N/A N/A 0.188±0.00 N/A N/A N/A N/A N/A 0.150±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C9 CIL_0009C9_0001 VISTA 6:17172901-17774881
CIL_0008JF CIL_0008JF_0001 VISTA 6:17172919-17774874
CIL_0008B7 CIL_0008B7_0001 VISTA 6:17234961-17839440
CIL_0003RO CIL_0003RO_0001 CGP 6:17281346-17557792
CIL_0003RP CIL_0003RP_0001 CGP 6:17393216-17611719

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0003779 IEA actin binding
GO:0005886 IEA plasma membrane
GO:0007010 IEA cytoskeleton organization
GO:0007163 TAS establishment or maintenance of cell polarity
GO:0007165 TAS signal transduction
GO:0007190 TAS activation of adenylate cyclase activity
GO:0007411 TAS axon guidance

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000045948 cap2 CAP, adenylate cyclase-associated protein, 2 (yeast) protein_coding Danio_rerio
ENSMUSG00000021373 Cap2 CAP, adenylate cyclase-associated protein, 2 (yeast) protein_coding Mus_musculus

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