C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: CAP, adenylate cyclase-associated protein, 2 (yeast)
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000378990 CAP2-006 ENSG00000112186 9606 + 6:17393645-17556795 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartMuscleOvaryPlacentaTestisENST00000378990
Transcript ID Adipose Adrenal Brain Breast Colon Heart Muscle Ovary Placenta Testis
ENST00000378990 0.257±0.00 3.391±0.00 29.931±0.00 3.142±2.81 12.464±0.00 14.123±0.00 91.042±0.00 1.017±0.73 0.886±0.00 2.738±2.53

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0009C9 CIL_0009C9_0001 VISTA 6:17172901-17774881
CIL_0008JF CIL_0008JF_0001 VISTA 6:17172919-17774874
CIL_0008B7 CIL_0008B7_0001 VISTA 6:17234961-17839440
CIL_0003RO CIL_0003RO_0001 CGP 6:17281346-17557792
CIL_0003RP CIL_0003RP_0001 CGP 6:17393216-17611719

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000902 IEA cell morphogenesis
GO:0003779 IEA actin binding
GO:0007010 IEA cytoskeleton organization

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000021802 Cap2-001 protein_coding Mus_musculus 0 1203
ENSMUST00000119341 Cap2-002 protein_coding Mus_musculus 0 848
ENSMUST00000126687 Cap2-003 processed_transcript Mus_musculus 4e-19 100

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