C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein kinase D3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000115825 PRKD3 9606 - 2:37250502-37324808 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000234179 PRKD3-201 37250505-37317079 protein_coding
  ENST00000379066 PRKD3-001 37250502-37317894 protein_coding
  ENST00000443187 PRKD3-004 37286232-37324808 protein_coding
  ENST00000443977 PRKD3-007 37260356-37274604 protein_coding
  ENST00000452104 PRKD3-008 37256698-37272423 protein_coding
  ENST00000464552 PRKD3-005 37292988-37316388 retained_intron
  ENST00000469275 PRKD3-003 37256662-37279390 retained_intron
  ENST00000475912 PRKD3-006 37282306-37290962 retained_intron
  ENST00000477132 PRKD3-009 37316814-37324370 processed_transcript
  ENST00000494667 PRKD3-002 37267565-37317023 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastColonHeartLiverLungMuscleOvaryPlacentaTestisENST00000234179ENST00000379066ENST00000494667
Transcript ID Adipose Bladder Brain Breast Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENST00000234179 6.684±0.00 N/A 3.401±0.00 4.644±0.86 4.194±1.60 3.215±0.00 1.942±0.00 4.613±0.00 2.704±0.00 3.600±0.00 1.627±0.39 13.294±0.00
ENST00000379066 N/A N/A N/A 3.798±0.00 N/A 2.300±0.00 N/A 6.742±4.87 N/A 4.106±0.00 1.355±0.08 N/A
ENST00000494667 N/A 2.601±0.00 N/A 4.597±0.00 N/A N/A 3.423±0.00 N/A N/A N/A N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085G CIL_00085G_0001 VISTA 2:37116727-37718317
CIL_0002IL CIL_0002IL_0001 CGP 2:37201612-37253403
CIL_0008VK CIL_0008VK_0001 VISTA 2:37223010-37826535
CIL_0002IK CIL_0002IK_0001 CGP 2:37231631-37324808
CIL_0002IN CIL_0002IN_0001 CGP 2:37250502-37373322

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004672 IEA protein kinase activity
GO:0004697 IEA protein kinase C activity
GO:0004713 IEA protein tyrosine kinase activity
GO:0005515 IPI protein binding
GO:0005524 IEA ATP binding
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0007205 TAS protein kinase C-activating G-protein coupled receptor signaling pathway
GO:0009103 IEA lipopolysaccharide biosynthetic process
GO:0016020 IEA membrane
GO:0016772 IEA transferase activity, transferring phosphorus-containing groups
GO:0016773 IEA phosphotransferase activity, alcohol group as acceptor
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079967 prkd3 protein kinase D3 protein_coding Danio_rerio
ENSMUSG00000024070 Prkd3 protein kinase D3 protein_coding Mus_musculus

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