C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: protein kinase D3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000494667 PRKD3-002 ENSG00000115825 9606 - 2:37267565-37317023 retained_intron

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBreastLiverENST00000494667
Transcript ID Bladder Breast Liver
ENST00000494667 2.601±0.00 4.597±0.00 3.423±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085G CIL_00085G_0001 VISTA 2:37116727-37718317
CIL_0002IL CIL_0002IL_0001 CGP 2:37201612-37253403
CIL_0008VK CIL_0008VK_0001 VISTA 2:37223010-37826535
CIL_0002IK CIL_0002IK_0001 CGP 2:37231631-37324808
CIL_0002IN CIL_0002IN_0001 CGP 2:37250502-37373322

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000119284 Prkd3-002 protein_coding Mus_musculus 0 2350
ENSMUST00000168887 Prkd3-201 protein_coding Mus_musculus 0 2331
ENSMUST00000003191 Prkd3-001 protein_coding Mus_musculus 0 2331
ENSMUST00000118768 Prkd3-004 protein_coding Mus_musculus 0 1862
ENSMUST00000124229 Prkd3-006 retained_intron Mus_musculus 0 1061
ENSMUST00000118991 Prkd3-005 protein_coding Mus_musculus 0 1061
ENSMUST00000146917 Prkd3-003 processed_transcript Mus_musculus 0 1059
ENSMUST00000130070 Prkd3-007 retained_intron Mus_musculus 0 490
ENSDART00000110322 PRKD1-201 protein_coding Danio_rerio 1e-23 117
ENSDART00000153937 PRKD1-001 protein_coding Danio_rerio 1e-23 117

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