C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0002IN_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000115825-ENSG00000115828 CGP 9606 2:37250502-37373322
GeneTranscriptPositionBiotype
ENSG00000115825 (PRKD3)
protein kinase D3 		ENST00000234179 (PRKD3-201) 37250505-37317079 protein_coding
ENST00000379066 (PRKD3-001) 37250502-37317894 protein_coding
ENST00000443187 (PRKD3-004) 37286232-37324808 protein_coding
ENST00000443977 (PRKD3-007) 37260356-37274604 protein_coding
ENST00000452104 (PRKD3-008) 37256698-37272423 protein_coding
ENST00000464552 (PRKD3-005) 37292988-37316388 retained_intron
ENST00000469275 (PRKD3-003) 37256662-37279390 retained_intron
ENST00000475912 (PRKD3-006) 37282306-37290962 retained_intron
ENST00000477132 (PRKD3-009) 37316814-37324370 processed_transcript
ENST00000494667 (PRKD3-002) 37267565-37317023 retained_intron
ENSG00000115828 (QPCT)
glutaminyl-peptide cyclotransferase 		ENST00000338415 (QPCT-001) 37344574-37373322 protein_coding
ENST00000404976 (QPCT-004) 37344594-37372742 protein_coding
ENST00000444022 (QPCT-006) 37368281-37372799 protein_coding
ENST00000469098 (QPCT-005) 37367123-37373030 retained_intron
ENST00000470075 (QPCT-002) 37344728-37360053 retained_intron
ENST00000480050 (QPCT-003) 37358712-37369702 retained_intron
ENSG00000232028 (AC007391.2)
 ENST00000433893 (AC007391.2-001) 37325340-37326797 lincRNA
CIL_0002IN_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000024070-ENSMUSG00000024084 CGP 10090 17:78949405-79090243
GeneTranscriptPositionBiotype
ENSMUSG00000024070 (Prkd3)
protein kinase D3 		ENSMUST00000003191 (Prkd3-001) 78949405-79013306 protein_coding
ENSMUST00000118768 (Prkd3-004) 78951641-79008505 protein_coding
ENSMUST00000118991 (Prkd3-005) 78971555-78985448 protein_coding
ENSMUST00000119284 (Prkd3-002) 78950549-79020816 protein_coding
ENSMUST00000124229 (Prkd3-006) 78969619-78985448 retained_intron
ENSMUST00000130070 (Prkd3-007) 79010127-79020777 retained_intron
ENSMUST00000146917 (Prkd3-003) 78972276-79008688 processed_transcript
ENSMUST00000168887 (Prkd3-201) 78949405-79020816 protein_coding
ENSMUSG00000024084 (Qpct)
glutaminyl-peptide cyclotransferase (glutaminyl cyclase) 		ENSMUST00000040789 (Qpct-201) 79051906-79090243 protein_coding
ENSMUSG00000098114 (Gm26957)
predicted gene, 26957 		ENSMUST00000182645 (Gm26957-001) 79041946-79042922 processed_pseudogene

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IN_0001ENSG00000115825ENST00000234179ENST00000379066ENST00000443187ENST00000443977ENST00000452104ENST00000464552ENST00000469275ENST00000475912ENST00000477132ENST00000494667ENSG00000115828ENST00000338415ENST00000404976ENST00000444022ENST00000469098ENST00000470075ENST00000480050ENSG00000232028ENST00000433893CIL_0002IN_0002ENSMUSG00000024070ENSMUST00000003191ENSMUST00000118768ENSMUST00000118991ENSMUST00000119284ENSMUST00000124229ENSMUST00000130070ENSMUST00000146917ENSMUST00000168887ENSMUSG00000024084ENSMUST00000040789ENSMUSG00000098114ENSMUST00000182645
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0002IN_0001ENSG00000115825ENST00000234179ENST00000379066ENST00000494667ENSG00000115828ENST00000338415ENST00000404976ENST00000469098ENST00000470075ENST00000480050ENSG00000232028ENST00000433893CIL_0002IN_0002ENSMUSG00000024070ENSMUST00000003191ENSMUST00000118768ENSMUST00000118991ENSMUST00000119284ENSMUST00000124229ENSMUST00000168887ENSMUSG00000024084ENSMUST00000040789ENSMUSG00000098114ENSMUST00000182645
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000115825 ENST00000234179 6.684±0.00 N/A N/A 3.401±0.00 4.644±0.86 4.194±1.60 3.215±0.00 N/A 1.942±0.00 4.613±0.00 2.704±0.00 3.600±0.00 1.627±0.39 13.294±0.00
ENST00000379066 N/A N/A N/A N/A 3.798±0.00 N/A 2.300±0.00 N/A N/A 6.742±4.87 N/A 4.106±0.00 1.355±0.08 N/A
ENST00000443187 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000443977 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000452104 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464552 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469275 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000475912 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477132 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000494667 N/A N/A 2.601±0.00 N/A 4.597±0.00 N/A N/A N/A 3.423±0.00 N/A N/A N/A N/A N/A
ENSG00000115828 ENST00000338415 3.566±0.00 3.673±0.00 N/A 4.020±3.00 0.859±0.62 11.313±0.00 0.364±0.32 4.620±0.00 0.967±0.00 1.870±1.52 N/A 3.305±2.90 4.999±0.70 2.976±2.67
ENST00000404976 N/A N/A N/A N/A N/A N/A 0.280±0.00 1.452±0.00 N/A 2.170±0.00 1.044±0.00 N/A N/A 0.210±0.00
ENST00000444022 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000469098 N/A N/A 0.088±0.00 N/A N/A 0.164±0.00 N/A N/A 0.787±0.00 0.654±0.00 N/A N/A N/A N/A
ENST00000470075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.151±0.00 0.468±0.00 N/A N/A
ENST00000480050 N/A N/A N/A N/A N/A N/A 0.201±0.00 N/A N/A N/A N/A N/A N/A 0.396±0.00
ENSG00000232028 ENST00000433893 N/A N/A N/A N/A 0.194±0.00 N/A N/A N/A N/A N/A N/A 0.068±0.00 N/A 1.613±0.37
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000024070 ENSMUST00000003191 4.010±1.17 1.458±0.53 2.638±0.00 1.674±1.12 4.765±0.80 1.286±0.60 1.142±0.28 2.070±1.17 2.607±0.98 6.927±1.68 0.755±0.18 4.936±1.80 3.297±1.75 0.619±0.17
ENSMUST00000118768 N/A N/A N/A N/A N/A 1.333±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000118991 N/A N/A N/A N/A N/A N/A N/A N/A 18.473±2.29 N/A N/A N/A N/A N/A
ENSMUST00000119284 3.565±1.63 1.789±0.69 N/A N/A 2.614±0.89 0.970±0.34 0.895±0.26 1.347±0.04 3.419±0.00 4.609±0.29 0.312±0.00 5.933±1.76 2.083±0.55 0.676±0.28
ENSMUST00000124229 N/A N/A N/A N/A N/A N/A N/A N/A 22.708±8.63 N/A N/A N/A N/A N/A
ENSMUST00000130070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000146917 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000168887 N/A N/A N/A 0.251±0.00 N/A 0.470±0.00 0.996±0.00 N/A 1.710±0.00 N/A 0.291±0.00 N/A 1.799±1.38 N/A
ENSMUSG00000024084 ENSMUST00000040789 12.125±4.00 1.901±0.23 10.972±1.45 3.324±0.71 8.951±1.53 8.802±2.07 3.162±0.39 1.599±0.28 12.234±6.17 4.503±0.14 0.579±0.14 5.104±1.67 2.622±1.02 14.165±5.62
ENSMUSG00000098114 ENSMUST00000182645 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.108±0.05

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