C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: protein kinase D3
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSMUSG00000024070 Prkd3 10090 - 17:78949405-79020816 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENSMUST00000003191 Prkd3-001 78949405-79013306 protein_coding
  ENSMUST00000118768 Prkd3-004 78951641-79008505 protein_coding
  ENSMUST00000118991 Prkd3-005 78971555-78985448 protein_coding
  ENSMUST00000119284 Prkd3-002 78950549-79020816 protein_coding
  ENSMUST00000124229 Prkd3-006 78969619-78985448 retained_intron
  ENSMUST00000130070 Prkd3-007 79010127-79020777 retained_intron
  ENSMUST00000146917 Prkd3-003 78972276-79008688 processed_transcript
  ENSMUST00000168887 Prkd3-201 78949405-79020816 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000003191ENSMUST00000118768ENSMUST00000118991ENSMUST00000119284ENSMUST00000124229ENSMUST00000168887
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000003191 4.010±1.17 1.458±0.53 2.638±0.00 1.674±1.12 4.765±0.80 1.286±0.60 1.142±0.28 2.070±1.17 2.607±0.98 6.927±1.68 0.755±0.18 4.936±1.80 3.297±1.75 0.619±0.17
ENSMUST00000118768 N/A N/A N/A N/A N/A 1.333±0.00 N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000118991 N/A N/A N/A N/A N/A N/A N/A N/A 18.473±2.29 N/A N/A N/A N/A N/A
ENSMUST00000119284 3.565±1.63 1.789±0.69 N/A N/A 2.614±0.89 0.970±0.34 0.895±0.26 1.347±0.04 3.419±0.00 4.609±0.29 0.312±0.00 5.933±1.76 2.083±0.55 0.676±0.28
ENSMUST00000124229 N/A N/A N/A N/A N/A N/A N/A N/A 22.708±8.63 N/A N/A N/A N/A N/A
ENSMUST00000168887 N/A N/A N/A 0.251±0.00 N/A 0.470±0.00 0.996±0.00 N/A 1.710±0.00 N/A 0.291±0.00 N/A 1.799±1.38 N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00085G CIL_00085G_0002 VISTA 17:78844758-79446183
CIL_0008VK CIL_0008VK_0002 VISTA 17:78923077-79528513
CIL_0002IK CIL_0002IK_0002 CGP 17:78937135-79020816
CIL_0002IN CIL_0002IN_0002 CGP 17:78949405-79090243

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004697 IEA protein kinase C activity
GO:0005515 IEA protein binding
GO:0005524 IEA ATP binding
GO:0005634 IEA nucleus
GO:0005737 IEA cytoplasm
GO:0006468 IEA protein phosphorylation
GO:0016020 IEA membrane
GO:0035556 IEA intracellular signal transduction
GO:0046872 IEA metal ion binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000079967 prkd3 protein kinase D3 protein_coding Danio_rerio
ENSG00000115825 PRKD3 protein kinase D3 protein_coding Homo_sapiens

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