C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: cytochrome P450, family 20, subfamily A, polypeptide 1
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000119004 CYP20A1 9606 + 2:203238449-203305840 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000356079 CYP20A1-001 203238940-203297345 protein_coding
  ENST00000428265 CYP20A1-010 203239021-203280115 nonsense_mediated_decay
  ENST00000429815 CYP20A1-003 203238982-203297226 protein_coding
  ENST00000431118 CYP20A1-005 203239027-203298286 nonsense_mediated_decay
  ENST00000443941 CYP20A1-011 203239035-203285732 protein_coding
  ENST00000449301 CYP20A1-002 203238977-203297242 nonsense_mediated_decay
  ENST00000461371 CYP20A1-004 203238982-203297014 processed_transcript
  ENST00000463131 CYP20A1-008 203239011-203285679 processed_transcript
  ENST00000489360 CYP20A1-009 203239021-203285732 processed_transcript
  ENST00000611416 CYP20A1-201 203238449-203305840 protein_coding
  ENST00000613925 CYP20A1-202 203239009-203305611 protein_coding

Homo sapiens EnsemblGRCh38

Genome
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Genes
Gene structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000356079ENST00000428265ENST00000431118ENST00000443941ENST00000449301ENST00000461371ENST00000611416ENST00000613925
Transcript ID Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000356079 N/A N/A N/A 1.397±0.00 N/A 1.602±0.00 2.818±0.00 3.116±0.00 N/A 4.482±0.00 N/A N/A
ENST00000428265 N/A N/A N/A N/A 2.320±0.00 N/A N/A N/A N/A N/A N/A N/A
ENST00000431118 N/A N/A N/A N/A N/A N/A N/A N/A N/A 3.332±0.00 2.382±0.00 1.723±0.00
ENST00000443941 N/A 4.363±0.00 N/A 3.991±0.00 N/A 5.630±0.00 N/A 10.217±0.00 2.649±0.00 N/A N/A N/A
ENST00000449301 N/A N/A N/A N/A N/A N/A N/A N/A 0.463±0.00 N/A N/A N/A
ENST00000461371 N/A N/A 3.801±0.00 N/A 1.702±0.23 3.926±0.36 3.498±1.05 2.288±0.00 N/A 5.395±1.03 2.701±0.22 3.476±0.12
ENST00000611416 1.746±0.00 N/A 0.515±0.00 0.409±0.00 N/A 1.729±0.00 N/A 0.309±0.00 0.280±0.00 1.287±0.77 0.428±0.00 1.527±0.76
ENST00000613925 N/A 3.528±0.00 N/A 2.386±0.00 N/A N/A N/A N/A N/A 3.892±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QW CIL_0001QW_0001 CGP 2:203014879-203305840
CIL_0000JP CIL_0000JP_0002 CGP 2:203238449-203447723

Gene Ontology
GO IDEvidence TypeGO Description
GO:0004497 IEA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000006040 cyp20a1 cytochrome P450, family 20, subfamily A, polypeptide 1 protein_coding Danio_rerio
ENSMUSG00000049439 Cyp20a1 cytochrome P450, family 20, subfamily a, polypeptide 1 protein_coding Mus_musculus

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