C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 20, subfamily A, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000356079 CYP20A1-001 ENSG00000119004 9606 + 2:203238940-203297345 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; ColonKidneyLiverLungOvaryENST00000356079
Transcript ID Colon Kidney Liver Lung Ovary
ENST00000356079 1.397±0.00 1.602±0.00 2.818±0.00 3.116±0.00 4.482±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QW CIL_0001QW_0001 CGP 2:203014879-203305840
CIL_0000JP CIL_0000JP_0002 CGP 2:203238449-203447723

Gene Ontology

GO IDEvidence TypeGO Description
GO:0004497 IEA monooxygenase activity
GO:0005506 IEA iron ion binding
GO:0016020 IDA membrane
GO:0016021 IEA integral component of membrane
GO:0016705 IEA oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen
GO:0020037 IEA heme binding
GO:0055114 IEA oxidation-reduction process

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000060608 Cyp20a1-001 protein_coding Mus_musculus 0 1413
ENSMUST00000148443 Cyp20a1-003 nonsense_mediated_decay Mus_musculus 0 1038
ENSMUST00000114202 Cyp20a1-002 retained_intron Mus_musculus 0 937

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