C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: cytochrome P450, family 20, subfamily A, polypeptide 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000431118 CYP20A1-005 ENSG00000119004 9606 + 2:203239027-203298286 nonsense_mediated_decay

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; OvaryPlacentaTestisENST00000431118
Transcript ID Ovary Placenta Testis
ENST00000431118 3.332±0.00 2.382±0.00 1.723±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001QW CIL_0001QW_0001 CGP 2:203014879-203305840
CIL_0000JP CIL_0000JP_0002 CGP 2:203238449-203447723

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000148443 Cyp20a1-003 nonsense_mediated_decay Mus_musculus 0 1194
ENSMUST00000060608 Cyp20a1-001 protein_coding Mus_musculus 0 1037
ENSMUST00000114202 Cyp20a1-002 retained_intron Mus_musculus 0 560
ENSMUST00000173269 Neu1-002 retained_intron Mus_musculus 0.000004 58
ENSMUST00000034431 Tmem170-201 protein_coding Mus_musculus 0.000004 58
ENSMUST00000105140 AW011738-201 protein_coding Mus_musculus 0.0002 53

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