C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Gene Info

Description: PNN-interacting serine/arginine-rich protein
Gene AccessionGene NameTax IDStrandPositionGene Biotype
ENSG00000132424 PNISR 9606 - 6:99398051-99425331 protein_coding
  Transcript Accession Transcript Name Position Transcript Biotype
  ENST00000369239 PNISR-007 99398051-99425308 protein_coding
  ENST00000438806 PNISR-201 99399964-99425331 protein_coding
  ENST00000460600 PNISR-004 99401460-99404546 processed_transcript
  ENST00000463021 PNISR-009 99408153-99410992 processed_transcript
  ENST00000466057 PNISR-006 99411791-99425258 processed_transcript
  ENST00000476159 PNISR-002 99401462-99406127 processed_transcript
  ENST00000478777 PNISR-008 99401461-99425308 nonsense_mediated_decay
  ENST00000481229 PNISR-003 99399975-99402597 processed_transcript
  ENST00000492294 PNISR-001 99410941-99425275 processed_transcript
  ENST00000498075 PNISR-005 99411736-99425270 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000369239ENST00000438806ENST00000460600ENST00000466057ENST00000478777
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000369239 1.097±0.00 2.308±0.00 N/A 1.378±0.00 N/A 0.996±0.00 N/A N/A N/A N/A 0.908±0.00 3.489±0.74 1.534±0.32 2.257±0.00
ENST00000438806 7.259±0.00 18.826±0.00 N/A 5.924±4.35 7.269±4.77 5.490±2.79 3.153±1.78 6.568±5.17 2.444±0.00 8.575±0.00 2.169±1.74 18.650±4.81 8.993±8.98 33.135±22.47
ENST00000460600 N/A N/A N/A N/A 6.513±0.00 N/A N/A N/A N/A 2.622±0.00 1.095±0.00 N/A N/A N/A
ENST00000466057 N/A N/A N/A N/A N/A N/A N/A 2.917±0.00 N/A N/A N/A N/A N/A N/A
ENST00000478777 N/A N/A 11.454±0.00 5.366±0.00 9.345±0.00 11.734±0.00 5.592±0.00 2.977±0.00 12.549±0.00 18.148±0.00 1.786±0.00 10.054±0.00 N/A N/A

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Y7 CIL_0001Y7_0002 CGP 6:99369400-99425331
CIL_0001YC CIL_0001YC_0002 CGP 6:99398051-99521728

Gene Ontology
GO IDEvidence TypeGO Description
GO:0005634 IDA nucleus
GO:0005737 IDA cytoplasm
GO:0044822 IDA poly(A) RNA binding

Homologs

ENSEMBL Accession Gene Name Description Biotype Species
ENSDARG00000069855 pnisr PNN-interacting serine/arginine-rich protein protein_coding Danio_rerio
ENSMUSG00000028248 Pnisr PNN interacting serine/arginine-rich protein_coding Mus_musculus

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