C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: PNN-interacting serine/arginine-rich protein
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000460600 PNISR-004 ENSG00000132424 9606 - 6:99401460-99404546 processed_transcript

Expression Patterns

Heat Map
Numeric Values
Transcript'; BreastLungMuscleENST00000460600
Transcript ID Breast Lung Muscle
ENST00000460600 6.513±0.00 2.622±0.00 1.095±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0001Y7 CIL_0001Y7_0002 CGP 6:99369400-99425331
CIL_0001YC CIL_0001YC_0002 CGP 6:99398051-99521728

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000148561 Pnisr-012 processed_transcript Mus_musculus 0 547
ENSMUST00000098238 Pnisr-005 protein_coding Mus_musculus 0 462
ENSMUST00000029911 Pnisr-001 protein_coding Mus_musculus 0 462
ENSMUST00000185001 Pnisr-004 nonsense_mediated_decay Mus_musculus 0 460
ENSMUST00000108229 Pnisr-002 protein_coding Mus_musculus 0 451
ENSDART00000133071 pnisr-006 retained_intron Danio_rerio 1e-34 152
ENSDART00000138109 pnisr-005 retained_intron Danio_rerio 0.000000000008 77
ENSDART00000123980 pnisr-002 protein_coding Danio_rerio 0.000000000008 77
ENSDART00000124515 pnisr-001 protein_coding Danio_rerio 0.000000000008 77

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