C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001YC_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069855-ENSDARG00000075013 CGP 7955 16:34978820-35041669
GeneTranscriptPositionBiotype
ENSDARG00000069855 (pnisr)
PNN-interacting serine/arginine-rich protein 		ENSDART00000123980 (pnisr-002) 34978828-34986252 protein_coding
ENSDART00000124515 (pnisr-001) 34978820-34987353 protein_coding
ENSDART00000133071 (pnisr-006) 34980053-34982966 retained_intron
ENSDART00000138109 (pnisr-005) 34982320-34984002 retained_intron
ENSDART00000141366 (pnisr-004) 34983361-34984043 retained_intron
ENSDART00000147544 (pnisr-003) 34983181-34984873 retained_intron
CIL_0001YC_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132424-ENSG00000123552 CGP 9606 6:99398051-99521728
GeneTranscriptPositionBiotype
ENSG00000123552 (USP45)
ubiquitin specific peptidase 45 		ENST00000327681 (USP45-003) 99432439-99515376 protein_coding
ENST00000329966 (USP45-004) 99482262-99515489 protein_coding
ENST00000369232 (USP45-006) 99501743-99515418 processed_transcript
ENST00000369233 (USP45-007) 99435544-99515422 protein_coding
ENST00000472914 (USP45-005) 99482514-99515376 protein_coding
ENST00000496090 (USP45-011) 99462598-99476207 protein_coding
ENST00000496518 (USP45-001) 99432436-99508781 nonsense_mediated_decay
ENST00000500704 (USP45-008) 99432379-99515425 protein_coding
ENST00000506871 (USP45-002) 99462464-99510230 nonsense_mediated_decay
ENST00000507717 (USP45-010) 99464636-99503773 protein_coding
ENST00000508908 (USP45-009) 99508726-99521728 protein_coding
ENST00000511403 (USP45-012) 99462596-99482865 protein_coding
ENST00000513344 (USP45-013) 99445962-99464902 retained_intron
ENSG00000132424 (PNISR)
PNN-interacting serine/arginine-rich protein 		ENST00000369239 (PNISR-007) 99398051-99425308 protein_coding
ENST00000438806 (PNISR-201) 99399964-99425331 protein_coding
ENST00000460600 (PNISR-004) 99401460-99404546 processed_transcript
ENST00000463021 (PNISR-009) 99408153-99410992 processed_transcript
ENST00000466057 (PNISR-006) 99411791-99425258 processed_transcript
ENST00000476159 (PNISR-002) 99401462-99406127 processed_transcript
ENST00000478777 (PNISR-008) 99401461-99425308 nonsense_mediated_decay
ENST00000481229 (PNISR-003) 99399975-99402597 processed_transcript
ENST00000492294 (PNISR-001) 99410941-99425275 processed_transcript
ENST00000498075 (PNISR-005) 99411736-99425270 processed_transcript
ENSG00000228439 (TSTD3)
thiosulfate sulfurtransferase (rhodanese)-like domain containing 3 		ENST00000452647 (TSTD3-001) 99520693-99531918 antisense

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YC_0001ENSDARG00000069855ENSDART00000123980ENSDART00000124515ENSDART00000133071ENSDART00000138109ENSDART00000141366ENSDART00000147544CIL_0001YC_0002ENSG00000123552ENST00000327681ENST00000329966ENST00000369232ENST00000369233ENST00000472914ENST00000496090ENST00000496518ENST00000500704ENST00000506871ENST00000507717ENST00000508908ENST00000511403ENST00000513344ENSG00000132424ENST00000369239ENST00000438806ENST00000460600ENST00000463021ENST00000466057ENST00000476159ENST00000478777ENST00000481229ENST00000492294ENST00000498075ENSG00000228439ENST00000452647
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001YC_0001ENSDARG00000069855ENSDART00000123980ENSDART00000124515ENSDART00000133071CIL_0001YC_0002ENSG00000123552ENST00000327681ENST00000329966ENST00000369233ENST00000496090ENST00000496518ENST00000500704ENST00000506871ENST00000507717ENST00000513344ENSG00000132424ENST00000369239ENST00000438806ENST00000460600ENST00000466057ENST00000478777ENSG00000228439ENST00000452647
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000069855 ENSDART00000123980 N/A N/A N/A 58.610±18.19 N/A N/A 11.477±8.25 10.844±6.68 1.537±0.00 N/A 2.463±0.00 N/A N/A N/A
ENSDART00000124515 N/A N/A N/A 24.440±0.00 N/A N/A 9.598±0.00 48.554±0.00 1.772±0.00 N/A 4.318±0.00 N/A N/A N/A
ENSDART00000133071 N/A N/A N/A 42.893±0.00 N/A N/A 16.956±0.00 N/A 1.932±0.00 N/A 6.553±0.00 N/A N/A N/A
ENSDART00000138109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000123552 ENST00000327681 N/A N/A N/A N/A N/A N/A 0.260±0.00 N/A N/A N/A N/A 0.344±0.00 N/A N/A
ENST00000329966 N/A N/A N/A 1.034±0.00 N/A N/A N/A N/A 0.586±0.00 0.450±0.00 N/A 1.514±0.00 0.313±0.03 0.567±0.00
ENST00000369232 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000369233 N/A N/A N/A 1.280±0.00 N/A N/A N/A N/A N/A 0.955±0.00 N/A N/A N/A N/A
ENST00000472914 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496090 N/A N/A N/A N/A N/A N/A 1.695±0.00 N/A N/A N/A N/A 0.789±0.00 N/A N/A
ENST00000496518 0.429±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.445±0.00 N/A N/A
ENST00000500704 0.270±0.00 N/A N/A 1.177±0.00 1.442±0.00 N/A 0.275±0.07 N/A 0.738±0.00 N/A 0.216±0.00 0.503±0.00 0.081±0.00 0.145±0.00
ENST00000506871 N/A N/A 0.858±0.00 N/A N/A N/A 0.596±0.00 N/A N/A 1.142±0.00 N/A 1.223±0.00 N/A N/A
ENST00000507717 N/A N/A N/A 5.559±0.00 N/A N/A N/A N/A N/A N/A 0.500±0.00 N/A N/A N/A
ENST00000508908 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000511403 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000513344 N/A N/A N/A 5.855±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000132424 ENST00000369239 1.097±0.00 2.308±0.00 N/A 1.378±0.00 N/A 0.996±0.00 N/A N/A N/A N/A 0.908±0.00 3.489±0.74 1.534±0.32 2.257±0.00
ENST00000438806 7.259±0.00 18.826±0.00 N/A 5.924±4.35 7.269±4.77 5.490±2.79 3.153±1.78 6.568±5.17 2.444±0.00 8.575±0.00 2.169±1.74 18.650±4.81 8.993±8.98 33.135±22.47
ENST00000460600 N/A N/A N/A N/A 6.513±0.00 N/A N/A N/A N/A 2.622±0.00 1.095±0.00 N/A N/A N/A
ENST00000463021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466057 N/A N/A N/A N/A N/A N/A N/A 2.917±0.00 N/A N/A N/A N/A N/A N/A
ENST00000476159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478777 N/A N/A 11.454±0.00 5.366±0.00 9.345±0.00 11.734±0.00 5.592±0.00 2.977±0.00 12.549±0.00 18.148±0.00 1.786±0.00 10.054±0.00 N/A N/A
ENST00000481229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000228439 ENST00000452647 1.178±0.00 N/A N/A 1.230±0.00 2.282±0.00 1.456±0.00 N/A 2.317±0.00 N/A N/A 0.833±0.00 1.456±0.60 0.688±0.18 1.408±0.22

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