C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_0001Y7_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSDARG00000069857-ENSDARG00000069855 CGP 7955 16:34966820-34987353
GeneTranscriptPositionBiotype
ENSDARG00000069855 (pnisr)
PNN-interacting serine/arginine-rich protein 		ENSDART00000123980 (pnisr-002) 34978828-34986252 protein_coding
ENSDART00000124515 (pnisr-001) 34978820-34987353 protein_coding
ENSDART00000133071 (pnisr-006) 34980053-34982966 retained_intron
ENSDART00000138109 (pnisr-005) 34982320-34984002 retained_intron
ENSDART00000141366 (pnisr-004) 34983361-34984043 retained_intron
ENSDART00000147544 (pnisr-003) 34983181-34984873 retained_intron
ENSDARG00000069857 (coq3)
coenzyme Q3 homolog, methyltransferase (yeast) 		ENSDART00000034109 (coq3-001) 34966820-34977417 protein_coding
ENSDART00000133351 (coq3-002) 34970573-34977201 retained_intron
CIL_0001Y7_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000132423-ENSG00000132424 CGP 9606 6:99369400-99425331
GeneTranscriptPositionBiotype
ENSG00000132423 (COQ3)
coenzyme Q3 methyltransferase 		ENST00000254759 (COQ3-001) 99369400-99394204 protein_coding
ENST00000369240 (COQ3-002) 99369404-99377454 protein_coding
ENST00000369242 (COQ3-201) 99369498-99394150 protein_coding
ENST00000479163 (COQ3-003) 99376118-99394191 processed_transcript
ENSG00000132424 (PNISR)
PNN-interacting serine/arginine-rich protein 		ENST00000369239 (PNISR-007) 99398051-99425308 protein_coding
ENST00000438806 (PNISR-201) 99399964-99425331 protein_coding
ENST00000460600 (PNISR-004) 99401460-99404546 processed_transcript
ENST00000463021 (PNISR-009) 99408153-99410992 processed_transcript
ENST00000466057 (PNISR-006) 99411791-99425258 processed_transcript
ENST00000476159 (PNISR-002) 99401462-99406127 processed_transcript
ENST00000478777 (PNISR-008) 99401461-99425308 nonsense_mediated_decay
ENST00000481229 (PNISR-003) 99399975-99402597 processed_transcript
ENST00000492294 (PNISR-001) 99410941-99425275 processed_transcript
ENST00000498075 (PNISR-005) 99411736-99425270 processed_transcript

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Y7_0001ENSDARG00000069855ENSDART00000123980ENSDART00000124515ENSDART00000133071ENSDART00000138109ENSDART00000141366ENSDART00000147544ENSDARG00000069857ENSDART00000034109ENSDART00000133351CIL_0001Y7_0002ENSG00000132423ENST00000254759ENST00000369240ENST00000369242ENST00000479163ENSG00000132424ENST00000369239ENST00000438806ENST00000460600ENST00000463021ENST00000466057ENST00000476159ENST00000478777ENST00000481229ENST00000492294ENST00000498075
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_0001Y7_0001ENSDARG00000069855ENSDART00000123980ENSDART00000124515ENSDART00000133071ENSDARG00000069857ENSDART00000034109CIL_0001Y7_0002ENSG00000132423ENST00000254759ENST00000369240ENST00000369242ENST00000479163ENSG00000132424ENST00000369239ENST00000438806ENST00000460600ENST00000466057ENST00000478777
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSDARG00000069855 ENSDART00000123980 N/A N/A N/A 58.610±18.19 N/A N/A 11.477±8.25 10.844±6.68 1.537±0.00 N/A 2.463±0.00 N/A N/A N/A
ENSDART00000124515 N/A N/A N/A 24.440±0.00 N/A N/A 9.598±0.00 48.554±0.00 1.772±0.00 N/A 4.318±0.00 N/A N/A N/A
ENSDART00000133071 N/A N/A N/A 42.893±0.00 N/A N/A 16.956±0.00 N/A 1.932±0.00 N/A 6.553±0.00 N/A N/A N/A
ENSDART00000138109 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000141366 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDART00000147544 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSDARG00000069857 ENSDART00000034109 N/A N/A N/A 4.701±3.45 N/A N/A 6.106±5.13 3.030±2.73 0.896±0.00 N/A 5.066±0.00 N/A N/A N/A
ENSDART00000133351 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000132423 ENST00000254759 N/A 0.813±0.00 0.324±0.00 1.960±0.40 1.756±0.00 1.454±0.40 2.476±0.96 4.051±1.11 N/A N/A N/A 2.855±1.58 0.675±0.26 1.381±0.00
ENST00000369240 N/A N/A N/A 1.428±0.00 N/A N/A N/A N/A N/A 0.541±0.00 4.047±0.00 N/A 0.710±0.00 N/A
ENST00000369242 0.823±0.00 1.754±0.00 N/A 4.209±0.00 1.259±0.74 0.649±0.49 3.766±2.65 N/A 1.870±1.36 0.867±0.00 2.089±0.35 4.029±0.88 3.102±0.05 1.849±0.83
ENST00000479163 1.307±0.00 N/A 0.113±0.00 N/A N/A N/A N/A N/A N/A 0.424±0.00 0.760±0.00 N/A N/A N/A
ENSG00000132424 ENST00000369239 1.097±0.00 2.308±0.00 N/A 1.378±0.00 N/A 0.996±0.00 N/A N/A N/A N/A 0.908±0.00 3.489±0.74 1.534±0.32 2.257±0.00
ENST00000438806 7.259±0.00 18.826±0.00 N/A 5.924±4.35 7.269±4.77 5.490±2.79 3.153±1.78 6.568±5.17 2.444±0.00 8.575±0.00 2.169±1.74 18.650±4.81 8.993±8.98 33.135±22.47
ENST00000460600 N/A N/A N/A N/A 6.513±0.00 N/A N/A N/A N/A 2.622±0.00 1.095±0.00 N/A N/A N/A
ENST00000463021 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000466057 N/A N/A N/A N/A N/A N/A N/A 2.917±0.00 N/A N/A N/A N/A N/A N/A
ENST00000476159 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000478777 N/A N/A 11.454±0.00 5.366±0.00 9.345±0.00 11.734±0.00 5.592±0.00 2.977±0.00 12.549±0.00 18.148±0.00 1.786±0.00 10.054±0.00 N/A N/A
ENST00000481229 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000492294 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000498075 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A

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